Job Description P08373 Confidence 99.94% Date Thu Jan 5 11:01:23 GMT 2012 Rank 11 Aligned Residues 169 % Identity 11% Template c3d2hA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:berberine bridge-forming enzyme; PDBTitle: structure of berberine bridge enzyme from eschscholzia californica,2 monoclinic crystal form Resolution 1.65 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.
Query SS confidence																																																	.	.
Query Sequence		G	I	D	H	N	A	Q	H	I	V	C	A	E	D	E	Q	Q	L	L	N	A	W	Q	Y	A	T	A	E	G	Q	P	V	L	I	L	G	E	G	S	N	V	L	F	L	E	D	Y	.	.	R	G	T	V	I	I	N	R	I	K	G	I	E	I	H	D	E	P	D	A	W	Y	L	H	V	G	A	G	E	N	W
Query Conservation																																																	.	.
Alig confidence																																																	.	.
Template Conservation
Template Sequence		S	L	I	S	K	P	S	A	I	I	L	P	G	S	K	E	E	L	S	N	T	I	R	C	I	R	K	G	S	W	T	I	R	L	R	S	G	G	H	S	Y	E	G	L	S	Y	T	S	D	T	P	F	I	L	I	D	L	M	N	L	N	R	V	S	I	D	L	E	S	E	T	A	W	V	E	S	G	S	T	L
Template Known Secondary structure		T	T	S				S							S													T	S	S							S	S				T	T		T	T	T			S	S								T	T								T	T	T	T						T	T		B
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.					.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																									.															.	.	.	.																											.	.
Query SS confidence																									.															.	.	.	.																											.	.
Query Sequence		H	R	L	V	K	Y	T	L	Q	E	G	M	P	G	L	E	N	L	A	L	I	P	G	.	C	V	G	S	S	P	I	Q	N	I	G	A	Y	G	.	.	.	.	V	E	L	Q	R	V	C	A	Y	V	D	S	V	E	L	A	T	G	K	Q	V	R	L	T	A	K	.	.	E	C	R	F	G	Y	R	D	S	I
Query Conservation																									.															.	.	.	.																											.	.
Alig confidence																									.															.	.	.	.														.													.	.						.	.	.	.
Template Conservation																																																									.																				.	.	.	.
Template Sequence		G	E	L	Y	Y	A	I	T	E	S	S	S	K	L	G	F	T	A	G	W	C	P	T	V	G	T	G	G	H	I	S	G	G	G	F	G	M	M	S	R	K	Y	G	L	A	A	D	N	V	V	D	A	I	L	I	.	D	A	N	G	A	I	L	D	R	Q	A	M	G	E	D	V	F	W	A	.	.	.	.	I
Template Known Secondary structure													S	S							S		T	T		B							T					T	T							G	G	G	G								.		T	T																	.	.	.	.
Template Predicted Secondary structure																																																									.																				.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.					220
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	H	E	Y	Q	D	R	F	A	I	V	A	V	G	L	R	L	P	K	E	W	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	G	G	G	G	G	V	W	G	A	I	Y	A	W	K	I	K	L	L	P	V	P	E
Template Known Secondary structure		T	T	S		T	T	S	S															S
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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