 |
Job Description | P08373 | Confidence | 99.45% | Date | Thu Jan 5 11:01:23 GMT 2012 |
Rank | 32 | Aligned Residues | 108 |
% Identity | 15% | Template | c2yvsA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:glycolate oxidase subunit glce; |
PDBTitle: crystal structure of glycolate oxidase subunit glce from thermus2 thermophilus hb8
|
Resolution | 2.00 Å |
|
 |
  |   |
72 | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | H | D | E | P | D | A | W | Y | L | H | V | G | A | G | E | N | W | H | R | L | V | K | Y | T | L | Q | E | G | M | P | G | L | E | N | L | A | L | I | P | G | C | V | G | S | S | P | I | Q | N | I | G | A | Y | G | V | E | L | Q | R | V | C | A | Y | V | D | S | V | E | L | A | T | G | K | Q | V | R | L | T | A |
Query Conservation |   |
|   |   |
|   |   |   |   |   |
|   |
|   |
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|   |
|
|
|   |
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|   |   |
|   |
|   |
|   |
|
|   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |   |
|   |
|
|   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|   |   |   |   |
|
| . |   |   |   |
|   |   |   |   |   |
|   |
Template Sequence |   |
M | E | V | H | A | A | D | Q | Y | L | V | A | P | G | E | A | D | L | L | E | V | H | A | R | L | A | G | T | G | L | F | P | P | F | P | P | V | E | L | P | G | G | V | G | G | L | V | A | R | G | G | F | A | Q | T | F | F | F | P | A | E | V | L | G | L | T | F | R | . |
T | P | K | G | R | R | V | R | A | G | G |
Template Known Secondary structure |   |
|  |  |  | T | T | T | T |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  | T | T | T | T |  |  |
| S | S |
| S |  |  |
| T | T |  |  |  |  |  |  |  | T | T |
| S | S | B | S | S |
| G | G | G | G |  |  |  |  |  |  |  | . |
| T | T | S |
|  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  | . |  |
|
|
|
|  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
. | 70 | . | . | . | . | . | . | . | . | . |
  |
  |   |
152 | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . |
Predicted Secondary structure |   |
 | . | . | . | . | . | . | . | . |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | . |
. |
. |
. |
. |
. |
. |
. |
E | C | R | F | G | Y | R | D | S | I | F | K | H | E | Y | Q | D | R | F | A | I | V | A | V | G | L | R | L | P | K | E | W | Q |
Query Conservation |   |
  | . | . | . | . | . | . | . | . |
|   |   |
|   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |
|
|
|   |
|   |
|   |
|   |   |   |   |   |
Alig confidence |   |
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   | . | . | . | . | . |
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|   |
Template Sequence |   |
V | V | V | K | N | V | Q | G | Y | D | L | V | R | L | F | V | . |
. |
. |
. |
. |
G | S | F | G | L | L | G | R | A | E | E | V | V | L | R | L | R | P | G | R | A |
Template Known Secondary structure |   |
S | S |
| S | S | S | S |
| S |
|  |  |  |  |  | T | . | . | . | . | . | T |
| T | T | T | T |
|  |  |  |  |  |  |  |  |
|  |  |
| S |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|