 |
Job Description | P08373 | Confidence | 16.49% | Date | Thu Jan 5 11:01:23 GMT 2012 |
Rank | 99 | Aligned Residues | 34 |
% Identity | 15% | Template | c2g0cA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:atp-dependent rna helicase dbpa; |
PDBTitle: structure of the rna binding domain (residues 404-479) of the bacillus2 subtilis yxin protein
|
Resolution | 1.70 Å |
|
  |   |
265 | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | G | W | L | I | D | Q | C | Q | L | K | G | M | Q | I | G | G | A | A | V | H | R | Q | Q | A | L | V | L | I | N | E | D | N | A |
Query Conservation |   |
|
|   |
|
|
|   |   |
|
|
|
|   |   |
|
|   |
|   |
|
|   |   |
|
|
|
|
|
|
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |   |   |
|
|   |   |   |   |
|
|   |
|   |
|   |
|   |   |
|   |
|   |
|   |   |   |   |   |
Template Sequence |   |
V | G | T | I | A | K | I | D | G | V | S | A | D | D | I | G | I | I | T | I | M | D | N | A | S | Y | V | E | I | L | N | G | K | G |
Template Known Secondary structure |   |
 |  |  |  |  | T | S | T | T |
|
| G | G | G |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |
| T | T |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
422 | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|