Job Description P08373 Confidence 98.29% Date Thu Jan 5 11:01:23 GMT 2012 Rank 35 Aligned Residues 155 % Identity 14% Template c1n62C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:carbon monoxide dehydrogenase medium chain; PDBTitle: crystal structure of the mo,cu-co dehydrogenase (codh), n-2 butylisocyanide-bound state Resolution 1.09 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																						.	.	.																			.																						.
Query SS confidence																																						.	.	.																			.																						.
Query Sequence		I	V	C	A	E	D	E	Q	Q	L	L	N	A	W	Q	Y	A	T	A	E	G	Q	P	V	L	I	L	G	E	G	S	N	V	L	F	L	.	.	.	E	D	Y	R	G	T	V	I	I	N	R	I	K	G	I	E	I	H	.	D	E	P	D	A	W	Y	L	H	V	G	A	G	E	N	W	H	R	L	V	K	.
Query Conservation																																						.	.	.																			.																						.
Alig confidence																						.	.	.														.	.	.																			.																						.
Template Conservation																						.	.	.
Template Sequence		Y	H	R	P	K	S	I	A	D	A	V	A	L	L	T	K	L	G	E	D	.	.	.	A	R	P	L	A	G	G	H	S	L	I	P	I	M	K	T	R	L	A	T	P	E	H	L	V	D	L	R	D	I	G	D	L	V	G	I	R	E	E	G	T	D	V	V	I	G	A	M	T	T	Q	H	A	L	I	G	S
Template Known Secondary structure						S	S												G	G	G	.	.	.					S	S		T	T							T	T	S				S						T	T		G	G	G	S						T	T						T	T		B
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.									.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.					.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.																						.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.																						.	.	.	.
Query Sequence		Y	T	L	Q	E	G	M	P	G	L	E	N	L	A	L	I	P	G	.	.	.	.	.	.	.	.	C	V	G	S	S	P	I	Q	N	I	G	A	Y	G	V	E	L	Q	R	V	C	.	.	.	.	A	Y	V	D	S	V	E	L	A	T	G	K	Q	V	R	L	T	A	K	E	C	R	F	G	Y	R	D	S	I
Query Conservation																				.	.	.	.	.	.	.	.																						.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.									.	.												.	.	.	.								.				.
Template Conservation																																				.	.																							.				.
Template Sequence		D	F	L	A	A	K	L	P	I	I	R	E	T	S	L	L	I	A	D	P	Q	I	R	Y	M	G	T	I	G	G	N	A	A	N	.	.	G	D	P	G	N	D	M	P	A	L	M	Q	C	L	G	A	A	Y	E	L	T	G	.	P	E	G	.	A	R	I	V	A	A	R	D	Y	Y	Q	G	A	Y	F	T	A
Template Known Secondary structure																T	T	S	S									B							S	.	.			T	T		S									T								.	T	T		.													T	T			S
Template Predicted Secondary structure																																				.	.																							.				.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	H	E	Y	Q	D	R	F	A	I	V	A	V	G	L	R	L	P	K	E	W	Q
Query Conservation
Alig confidence							.	.	.	.
Template Conservation							.	.	.	.
Template Sequence		I	E	P	G	E	.	.	.	.	L	L	T	A	I	R	I	P	V	P	P	T	G	H
Template Known Secondary structure				T	T		.	.	.	.												T	T
Template Predicted Secondary structure							.	.	.	.
Template SS confidence
		161	.	.	.	.					.	.	.	.	170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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