Job Description P08373 Confidence 100.00% Date Thu Jan 5 11:01:23 GMT 2012 Rank 1 Aligned Residues 340 % Identity 100% Template c1mbbA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:uridine diphospho-n-acetylenolpyruvylglucosamine PDBTitle: oxidoreductase Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	S	L	K	P	W	N	T	F	G	I	D	H	N	A	Q	H	I	V	C	A	E	D	E	Q	Q	L	L	N	A	W	Q	Y	A	T	A	E	G	Q	P	V	L	I	L	G	E	G	S	N	V	L	F	L	E	D	Y	R	G	T	V	I	I	N	R	I	K	G	I	E	I	H	D	E	P	D	A	W	Y	L	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	S	L	K	P	W	N	T	F	G	I	D	H	N	A	Q	H	I	V	C	A	E	D	E	Q	Q	L	L	N	A	W	Q	Y	A	T	A	E	G	Q	P	V	L	I	L	G	E	G	S	N	V	L	F	L	E	D	Y	R	G	T	V	I	I	N	R	I	K	G	I	E	I	H	D	E	P	D	A	W	Y	L	H
Template Known Secondary structure			B		G	G	G	S	T	T					B									S														T	T							S	S		T	T					S																				T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	A	G	E	N	W	H	R	L	V	K	Y	T	L	Q	E	G	M	P	G	L	E	N	L	A	L	I	P	G	C	V	G	S	S	P	I	Q	N	I	G	A	Y	G	V	E	L	Q	R	V	C	A	Y	V	D	S	V	E	L	A	T	G	K	Q	V	R	L	T	A	K	E	C	R	F	G	Y	R	D	S	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	G	A	G	E	N	W	H	R	L	V	K	Y	T	L	Q	E	G	M	P	G	L	E	N	L	A	L	I	P	G	C	V	G	S	S	P	I	Q	N	I	G	A	Y	G	V	E	L	Q	R	V	C	A	Y	V	D	S	V	E	L	A	T	G	K	Q	V	R	L	T	A	K	E	C	R	F	G	Y	R	D	S	I
Template Known Secondary structure				T	T	S	B											T	T			S		G	G	G	T	T			S	B	G	G	G	T	T	T	T	T				T	T			G	G	G	T									G	G	G								T	T	T	T	T		B	T	T	B		G
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	H	E	Y	Q	D	R	F	A	I	V	A	V	G	L	R	L	P	K	E	W	Q	P	V	L	T	Y	G	D	L	T	R	L	D	P	T	T	V	T	P	Q	Q	V	F	N	A	V	C	H	M	R	T	T	K	L	P	D	P	K	V	N	G	N	A	G	S	F	F	K	N	P	V	V	S	A	E	T	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	K	H	E	Y	Q	D	R	F	A	I	V	A	V	G	L	R	L	P	K	E	W	Q	P	V	L	T	Y	G	D	L	T	R	L	D	P	T	T	V	T	P	Q	Q	V	F	N	A	V	C	H	M	R	T	T	K	L	P	D	P	K	V	N	G	N	A	G	S	F	F	K	N	P	V	V	S	A	E	T	A	K
Template Known Secondary structure		G	G	T	T	T	T	T	T												S	S							S	G	G	G	T	T	S		T	T	T																		S			T	T	T	S						S	B
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	L	S	Q	F	P	T	A	P	N	Y	P	Q	A	D	G	S	V	K	L	A	A	G	W	L	I	D	Q	C	Q	L	K	G	M	Q	I	G	G	A	A	V	H	R	Q	Q	A	L	V	L	I	N	E	D	N	A	K	S	E	D	V	V	Q	L	A	H	H	V	R	Q	K	V	G	E	K	F	N	V	W	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	L	S	Q	F	P	T	A	P	N	Y	P	Q	A	D	G	S	V	K	L	A	A	G	W	L	I	D	Q	C	Q	L	K	G	M	Q	I	G	G	A	A	V	H	R	Q	Q	A	L	V	L	I	N	E	D	N	A	K	S	E	D	V	V	Q	L	A	H	H	V	R	Q	K	V	G	E	K	F	N	V	W	L
Template Known Secondary structure								T	T							T	T	S												T	T	T		T	T				T	T					T	T		T	T						S	S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	E	V	R	F	I	G	A	S	G	E	V	S	A	V	E	T	I	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	P	E	V	R	F	I	G	A	S	G	E	V	S	A	V	E	T	I	S
Template Known Secondary structure			B		S					T	T
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions