Job Description P08373 Confidence 99.91% Date Thu Jan 5 11:01:23 GMT 2012 Rank 26 Aligned Residues 195 % Identity 14% Template c1f0xA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-lactate dehydrogenase; PDBTitle: crystal structure of d-lactate dehydrogenase, a peripheral2 membrane respiratory enzyme. Resolution 1.90 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.							.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.
Query Sequence		H	N	A	Q	H	I	V	C	A	E	D	E	Q	Q	L	L	N	A	W	Q	Y	A	T	A	E	G	Q	P	V	L	I	L	G	E	G	S	N	V	L	F	L	E	D	Y	.	.	.	.	.	.	R	G	T	V	I	I	N	R	I	K	G	I	E	I	H	D	E	P	D	A	W	Y	L	H	V	G	A	G	E	N
Query Conservation																																														.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.
Template Conservation
Template Sequence		G	D	A	L	A	V	V	F	P	G	S	L	L	E	L	W	R	V	L	K	A	C	V	T	A	D	K	I	I	L	M	Q	A	A	N	T	G	L	T	E	G	S	T	P	N	G	N	D	Y	D	R	D	V	V	I	I	S	T	L	R	L	D	K	L	H	V	L	G	K	G	E	Q	V	L	A	Y	P	G	T	T
Template Known Secondary structure		B			S						S	S														T	T							S	S				S	S	S	T	T	S			B	S			S	S								T	T								T	T	T	T						T	T		B
Template Predicted Secondary structure
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																.										.														.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.										.														.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	H	R	L	V	K	Y	T	L	Q	E	G	M	P	.	G	L	E	N	L	A	L	I	P	.	G	C	V	G	S	S	P	I	Q	N	I	G	A	.	.	.	.	.	Y	G	V	E	L	Q	R	V	C	A	Y	V	D	S	V	E	L	A	T	G	K	Q	V	R	L	T	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																.										.														.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.										.														.	.	.	.	.				.												.											.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.												.
Template Sequence		L	Y	S	L	E	K	A	L	K	P	L	G	R	E	P	H	S	V	I	G	S	S	C	I	G	A	S	V	I	G	G	I	C	N	N	S	G	G	S	L	V	Q	R	G	P	A	.	Y	T	E	M	S	L	F	A	R	I	N	.	E	D	G	K	L	T	L	V	N	H	L	G	I	D	L	G	E	T	P	E	Q
Template Known Secondary structure										G	G	G	T				S				G	G	G	G	G	T		B							T	T				S		T	T	S		S	S	.			S									.	T	T	S								S	S	B				S	S
Template Predicted Secondary structure																																																.												.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
																																												151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	E	C	R	F	G	Y	R	D	S	I	F	K	H	E	Y	Q	D	R	F	A	I	V	A	V	G	L	R	L	P	K	E	W	Q	P	V	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.														.
Template Conservation																																																				.	.	.														.
Template Sequence		I	L	S	K	L	D	D	D	R	I	K	D	D	D	V	R	H	D	G	R	H	A	H	D	Y	D	Y	V	H	R	V	R	D	I	E	A	D	T	P	A	R	Y	N	A	D	P	D	R	L	F	.	.	.	E	S	S	G	C	A	G	K	L	A	V	F	A	.	V	R	L	D	T	F	E	A	E	K	N	Q	Q
Template Known Secondary structure								T	T				G	G	G	B				S			S	S		T	T								T	T		S	S		S			T	T		G	G	G			.	.	.	S	S	T	T		T	T	S	S					.										S	S
Template Predicted Secondary structure																																																				.	.	.														.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.				.	.	.	.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	G	D	L	T	R	L	D	P	T	T	V	T	P	Q	Q	V	F	N	A	V	C	H	M	R	T	T	K	L	P	D	P
Query Conservation
Alig confidence		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	V	F	Y	I	G	T	N	Q	P	E	V	L	T	E	I	R	R	H	I	L	A	N	F	E	N	L	P
Template Known Secondary structure		.	.	.	.	.	.							S																	S	S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions