Job Description P75691 Confidence 100.00% Date Thu Jan 5 12:13:10 GMT 2012 Rank 41 Aligned Residues 309 % Identity 17% Template c3pi7A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh oxidoreductase; PDBTitle: crystal structure of a putative nadph:quinone reductase (mll3093) from2 mesorhizobium loti at 1.71 a resolution Resolution 1.71 Å

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		2	.	.	.	.	.	.	.	10	.	.															.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.
Query Sequence		K	I	K	A	V	G	A	Y	S	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	L	E	P	M	D	I	T	R	R	E	P	G	P	N	D	V	K	I	E	I	A	Y	C	G	V	C	H	S	D	L	H	Q	V	R	S	E	W	A	G	T	.	V	Y	P	C	V	P	G	H	E	I	V	G
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.
Template Conservation
Template Sequence		E	X	K	A	L	L	L	V	G	D	G	Y	T	K	T	P	S	G	S	A	L	E	A	X	E	P	Y	L	E	Q	G	R	I	A	V	P	A	P	G	P	S	Q	V	L	I	K	V	N	L	A	S	I	N	P	S	D	V	A	F	I	K	G	Q	Y	G	Q	P	R	V	K	G	R	P	A	G	F	E	G	V	G
Template Known Secondary structure										S		B	S		S	S				S					S	T	T	T													T	T																				T	T		S	S	S		B		T	T	S	B			S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	V	A	V	G	D	Q	V	E	K	Y	A	P	G	D	L	V	G	V	G	C	I	V	D	S	C	K	H	C	E	E	C	E	D	G	L	E	N	Y	C	D	H	M	T	G	T	Y	N	S	P	T	P	D	E	P	G	H	T	L	G	G	Y	S	Q	Q	I	V	V	H	E	R	Y	V	L	R	I	R	H	P
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	I	V	A	G	G	D	E	P	Y	A	K	S	L	V	G	K	R	V	A	F	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	S	N	W	G	S	W	A	E	Y	A	V	A	E	A	A	A	C	I	P	L	L	D	T
Template Known Secondary structure								S	S							T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	S			S	S	B	S						G	G	G						T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.																																	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	Q	L	A	A	V	A	P	L	L	C	A	G	I	T	T	Y	S	P	L	R	H	W	Q	A	G	P	G	K	K	V	G	V	V	G	I	G	G	L	G	H	M	G	I	K	L	A	H	A	M	G	A	H	V	V	A	F	T	T	S	E	A	K	R	E	A	A	K	A	L	G	A	D	E	V	V	N	S	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	D	E	D	G	A	A	X	I	V	N	P	L	T	A	I	A	X	F	D	I	V	K	Q	E	G	E	K	A	F	V	X	T	A	G	A	S	Q	L	C	K	L	I	I	G	L	A	K	E	E	G	F	R	P	I	V	T	V	R	R	D	E	Q	I	A	L	L	K	D	I	G	A	A	H	V	L	N	E	K
Template Known Secondary structure		S						T	T	S	S																			S					S	S	T	T	S														T								S		G	G	G								T		S					T	T
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		227	.	.	230	.	.	.	.					.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.																																									.																							.	.	.	.	.
Query SS confidence										.	.	.	.																																									.																							.	.	.	.	.
Query Sequence		N	A	D	E	M	A	A	H	.	.	.	.	L	K	S	F	D	F	I	L	N	T	V	A	A	P	H	N	L	D	D	F	T	T	L	L	K	R	D	G	T	M	T	L	V	G	A	P	A	T	P	H	.	K	S	P	E	V	F	N	L	I	M	K	R	R	A	I	A	G	S	M	I	G	G	.	.	.	.	.
Query Conservation										.	.	.	.																																									.																							.	.	.	.	.
Alig confidence										.	.	.	.																																									.																							.	.	.	.	.
Template Conservation
Template Sequence		A	P	D	F	E	A	T	L	R	E	V	X	K	A	E	Q	P	R	I	F	L	D	A	V	T	G	P	L	A	S	A	I	F	N	A	X	P	K	R	A	R	W	I	I	Y	G	R	L	D	P	D	A	T	V	I	R	E	P	G	Q	L	I	F	Q	H	K	H	I	E	G	F	W	L	S	E	W	X	R	Q	F
Template Known Secondary structure		S	T	T																				S	S												S		T	T									S			S					S		T						S																T
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
						297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	I	P	E	T	Q	E	M	L	D	F	C	A	E	H	G	I	V	A	D	I	E	M	I	R	A	D	Q	I	N	E	A	Y	E	R	M	L	R	G	D	V	K	Y	R	F	V	I	D
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																																		.
Template Conservation																																							.
Template Sequence		K	E	R	R	G	P	A	I	L	E	A	Q	K	R	F	S	D	G	R	W	S	T	V	T	A	V	V	P	L	A	E	A	I	A	W	V	P	.	A	E	L	T	K	P	N	G	K	V	F	I	R
Template Known Secondary structure																		T	S	S																			.				T	S	S	S	S
Template Predicted Secondary structure																																							.
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions