Job Description P75691 Confidence 100.00% Date Thu Jan 5 12:13:10 GMT 2012 Rank 51 Aligned Residues 336 % Identity 14% Template c3iupB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative nadph:quinone oxidoreductase; PDBTitle: crystal structure of putative nadph:quinone oxidoreductase2 (yp_296108.1) from ralstonia eutropha jmp134 at 1.70 a resolution Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	I	K	A	V	G	A	Y	S	A	K	Q	P	L	E	P	M	D	I	T	R	R	E	P	G	P	N	D	V	K	I	E	I	A	Y	C	G	V	C	H	S	D	L	H	Q	V	R	S	E	W	A	G	T	V	Y	P	C	V	P	G	H	E	I	V	G	R	V	V	A	V	G	D	Q	V	E	K	Y	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	L	R	S	R	I	K	S	S	G	E	L	E	L	S	L	D	S	I	D	T	P	H	P	G	P	D	E	V	L	I	R	I	E	A	S	P	L	N	P	S	D	L	G	L	L	F	G	A	A	D	X	S	T	A	K	A	S	G	T	A	E	R	P	I	V	T	A	R	V	P	E	G	A	X	R	S	X	A
Template Known Secondary structure										T	T	S																T	T																					T	T												S	S	S									G	G	G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	L	V	G	V	G	C	I	V	D	S	C	K	H	C	E	E	C	E	D	G	L	E	N	Y	C	D	H	M	T	G	T	Y	N	S	P	T	P	D	E	P	G	H	T	L	G	G	Y	S	Q	Q	I	V	V	H	E	R	Y	V	L	R	I	R	H	P	Q	E	Q	L	A	A	V	A	P	L	L	C	A	G
Query Conservation
Alig confidence						.																															.	.	.	.	.	.
Template Conservation						.																															.	.	.	.	.	.
Template Sequence		G	R	L	D	.	A	S	X	P	V	G	N	E	G	A	G	V	V	V	E	A	G	S	S	P	A	A	Q	A	L	X	G	K	T	V	.	.	.	.	.	.	A	A	I	G	G	A	X	Y	S	Q	Y	R	C	I	P	A	D	Q	C	L	V	L	P	E	G	A	T	P	A	D	G	A	S	S	F	V	N	P	L
Template Known Secondary structure		G	G	T	T	.							S											S	S					T	T	T	T				.	.	.	.	.	.					S			S	B	S						G	G	G						T	T							T	T	S	S
Template Predicted Secondary structure						.																															.	.	.	.	.	.
Template SS confidence
		85	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.							.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		I	T	T	Y	S	P	L	R	H	W	Q	A	G	P	G	K	K	V	G	V	V	G	I	G	G	L	G	H	M	G	I	K	L	A	H	A	M	G	A	H	V	V	A	F	T	T	S	E	A	K	R	E	A	A	K	A	L	G	A	D	E	V	V	N	S	R	N	A	D	E	M	A	A	H	L	K	S	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																																																																															.	.	.
Template Conservation
Template Sequence		T	A	L	G	X	V	E	T	X	R	L	E	G	H	S	A	L	V	H	T	A	A	A	S	N	L	G	Q	X	L	N	Q	I	C	L	K	D	G	I	K	L	V	N	I	V	R	K	Q	E	Q	A	D	L	L	K	A	Q	G	A	V	H	V	C	N	A	A	S	P	T	F	X	Q	D	L	T	E	A	L	V	S
Template Known Secondary structure													T	T		S					S	S	T	T	S														T								S	S										T	T		S					T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
			238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.																		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.
Query SS confidence		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.
Query Sequence		.	F	D	F	I	L	N	T	V	A	A	P	H	N	L	D	D	F	T	T	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	R	D	G	T	M	T	L	V	G	A	P	A	T	P	H	K	S	P	E	V	F	N	L	I	M	K	R	R	A	I	A	G	S	M	I	G	.	.	.	.
Query Conservation		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.
Alig confidence		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.
Template Conservation
Template Sequence		T	G	A	T	I	A	F	D	A	T	G	G	G	K	L	G	G	Q	I	L	T	C	X	E	A	A	L	N	K	S	A	R	E	Y	S	R	Y	G	S	T	T	H	K	Q	V	Y	L	Y	G	G	L	D	T	S	P	T	E	F	N	R	N	F	G	X	A	W	G	X	G	G	W	L	L	F	P	F	L	Q	K	I
Template Known Secondary structure										S					S																T			S			T	T			S	S										S											S		S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
					296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.			.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure		.	.	.																						.												.	.
Query SS confidence		.	.	.																						.												.	.
Query Sequence		.	.	.	G	I	P	E	T	Q	E	M	L	D	F	C	A	E	H	G	I	V	A	D	I	.	E	M	I	R	A	D	Q	I	N	E	A	.	.	Y	E	R	M	L	R	G	D	V	K	Y	R	F	V	I	D
Query Conservation		.	.	.																						.												.	.
Alig confidence		.	.	.																						.												.	.
Template Conservation
Template Sequence		G	R	E	R	A	N	A	L	K	Q	R	V	V	A	E	L	K	T	T	F	A	S	H	Y	S	K	E	I	S	L	A	E	V	L	D	L	D	X	I	A	V	Y	N	K	R	A	T	G	E	K	Y	L	I	N
Template Known Secondary structure																T	T	T	T	T	T					S									T									T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions