Phyre 2 alignment of P75691 with c2dfvB

Job Description P75691
Confidence 100.00% Date Thu Jan 5 12:13:10 GMT 2012

Rank 28 Aligned Residues 331

% Identity 24% Template c2dfvB_

PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:probable l-threonine 3-dehydrogenase; PDBTitle: hyperthermophilic threonine dehydrogenase from pyrococcus horikoshii

Resolution 2.05 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.
Query SS confidence																																																			.	.	.
Query Sequence	K	I	K	A	V	G	A	Y	S	A	K	Q	P	L	E	P	M	D	I	T	R	R	E	P	G	P	N	D	V	K	I	E	I	A	Y	C	G	V	C	H	S	D	L	H	Q	V	R	S	E	W	.	.	.	A	G	T	V	Y	P	C	V	P	G	H	E	I	V	G	R	V	V	A	V	G	D	Q	V	E	K	Y
Query Conservation																																																			.	.	.
Alig confidence																																																			.	.	.
Template Conservation
Template Sequence	K	X	V	A	I	X	K	T	K	P	G	Y	G	A	E	L	V	E	V	D	V	P	K	P	G	P	G	E	V	L	I	K	V	L	A	T	S	I	C	G	T	D	L	H	I	Y	E	W	N	E	W	A	Q	S	R	I	K	P	P	Q	I	X	G	H	E	V	A	G	E	V	V	E	I	G	P	G	V	E	G	I
Template Known Secondary structure									S	S	S	S	S													T	T																					T										S	S																T	T			S
Template Predicted Secondary structure
Template SS confidence
	4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.

	79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	A	P	G	D	L	V	G	V	G	C	I	V	D	S	C	K	H	C	E	E	C	E	D	G	L	E	N	Y	C	D	H	M	T	G	T	Y	N	S	P	T	P	D	E	P	G	H	T	L	G	G	Y	S	Q	Q	I	V	V	H	E	R	Y	V	L	R	I	R	H	P	Q	E	Q	L	A	A	V	A	P	L	L	C
Query Conservation
Alig confidence										.																										.	.	.	.	.	.	.	.
Template Conservation										.																										.	.	.	.	.	.	.	.
Template Sequence	E	V	G	D	Y	V	S	V	E	.	T	H	I	V	C	G	K	C	Y	A	C	R	R	G	Q	Y	H	V	C	Q	N	T	K	I	F	.	.	.	.	.	.	.	.	G	V	D	T	D	G	V	F	A	E	Y	A	V	V	P	A	Q	N	I	W	K	N	P	K	S	I	P	P	E	Y	A	T	L	Q	E	P	L
Template Known Secondary structure		T	T							.						S		S					T	T		G	G	G		T	T				T	.	.	.	.	.	.	.	.	T	T	T	S			S	S	B	S						G	G	G						T	T	S						T	T
Template Predicted Secondary structure										.																										.	.	.	.	.	.	.	.
Template SS confidence
	84	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.									.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

	159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																											.																																					.
Query SS confidence																																											.																																					.
Query Sequence	A	G	I	T	T	Y	S	P	L	R	H	W	Q	A	G	P	G	K	K	V	G	V	V	G	I	G	G	L	G	H	M	G	I	K	L	A	H	A	M	G	A	H	.	V	V	A	F	T	T	S	E	A	K	R	E	A	A	K	A	L	G	A	D	E	V	V	N	S	R	N	A	D	E	M	A	A	H	L	K	.
Query Conservation																																											.																																					.
Alig confidence										.	.	.																															.																																					.
Template Conservation										.	.	.
Template Sequence	G	N	A	V	D	T	V	L	A	.	.	.	G	P	I	S	G	K	S	V	L	I	T	G	A	G	P	L	G	L	L	G	I	A	V	A	K	A	S	G	A	Y	P	V	I	V	S	E	P	S	D	F	R	R	E	L	A	K	K	V	G	A	D	Y	V	I	N	P	F	E	E	D	V	V	K	E	V	X	D	I
Template Known Secondary structure								T	T	.	.	.	S			T	T									S													T	T			S						S												T		S					T	T	T	S
Template Predicted Secondary structure										.	.	.
Template SS confidence
	155	.	.	.	.	160	.	.	.				.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

					237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.		.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure	.	.	.	.																																																													.
Query SS confidence	.	.	.	.																																																													.
Query Sequence	.	.	.	.	S	F	D	F	I	L	N	T	V	A	A	P	H	N	L	D	D	F	T	T	L	L	K	R	D	G	T	M	T	L	V	G	A	P	A	T	P	H	K	S	P	E	V	F	N	L	I	M	K	R	R	A	I	A	G	S	M	I	G	G	.	I	P	E	T	Q	E	M	L	D	F	C	A	E	H	G
Query Conservation	.	.	.	.																																																													.
Alig confidence	.	.	.	.																																																													.
Template Conservation
Template Sequence	T	D	G	N	G	V	D	V	F	L	E	F	S	G	A	P	K	A	L	E	Q	G	L	Q	A	V	T	P	A	G	R	V	S	L	L	G	L	Y	P	G	K	V	T	I	D	F	N	N	L	I	I	F	K	A	L	T	I	Y	G	I	T	G	R	H	L	W	E	T	W	Y	T	V	S	R	L	L	Q	S	G	K
Template Known Secondary structure	T	T	T	S									S																										S	S										T	T	T	T	T								S			T	T													T
Template Predicted Secondary structure
Template SS confidence
	232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

	312	.	.				.	.	.	.	.	320		.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure				.	.	.							.
Query SS confidence				.	.	.							.
Query Sequence	I	V	A	.	.	.	D	I	E	M	I	R	.	A	D	Q	I	N	E	A	Y	E	R	M	L	R	G	D	V	K	Y	R	F	V	I	D	N	R
Query Conservation				.	.	.							.
Alig confidence				.	.	.							.																	.
Template Conservation																														.
Template Sequence	L	N	L	D	P	I	I	T	H	K	Y	K	G	F	D	K	Y	E	E	A	F	E	L	X	R	A	G	K	T	.	G	K	V	V	F	X	L	K
Template Known Secondary structure				G	G	G							S	S	T	T										T	T			.	S
Template Predicted Secondary structure																														.
Template SS confidence
	312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340		.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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