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Job DescriptionP75691
Confidence100.00%DateThu Jan 5 12:13:10 GMT 2012
Rank43Aligned Residues311
% Identity17%Templatec1y9eB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:hypothetical protein yhfp; PDBTitle: crystal structure of bacillus subtilis protein yhfp with2 nad bound
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MKIKAVGAYSAKQP. . LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGT. VYPCVPGHEIVGRVVAVGDQVEK
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Template Sequence  L. FQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS. . SNDPR
Template Known Secondary structure  .B



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   4 .....10.........20.........30.........40.........50.........60.........70..... ....80
 
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Query Sequence  YAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLL
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Template Sequence  FAEGDEVIATSYEL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GVSRDGGLSEYASVPGDWLVPLPQNLSLKEAXVYGT
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STTB..............................TTTB

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   81........90.... .....100.........110.........120.........130
 
   158.160......... 170.........180.........190.........200.........210.........220....... ..230.
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Query Sequence  CAGITTYSPLRH. . . . WQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRN. . ADEM
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Template Sequence  AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSXLNKRGYDVVASTGNREAADYLKQLGASEVISREDVYDGTL
Template Known Secondary structure  TTT

TTS

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   131........140.........150.........160.........170.........180.........190.........200.........210
 
   232.......240.........250.........260.........270.........280.........290...... ...300.....
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Query Sequence  AAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGG. . . . . . IPETQEMLD
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Template Sequence  KALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPXDVRAAVWERXSS
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   211........220.........230.........240.........250.........260.........270.........280.........290
 
   306...310....... ..320.........330.........340....
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Query Sequence  FCAEHGIVADIE. MIRADQINEAYERMLRGDVKYRFVIDN
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Template Sequence  DLKPDQLLTIVDREVSLEETPGALKDILQNRIQGRVIVKL
Template Known Secondary structure  TT

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   291........300.........310.........320.........330
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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