Job Description P75691 Confidence 100.00% Date Thu Jan 5 12:13:10 GMT 2012 Rank 8 Aligned Residues 342 % Identity 22% Template c1ma0B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:glutathione-dependent formaldehyde dehydrogenase; PDBTitle: ternary complex of human glutathione-dependent formaldehyde2 dehydrogenase with nad+ and dodecanoic acid Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	I	K	A	V	G	A	Y	S	A	K	Q	P	L	E	P	M	D	I	T	R	R	E	P	G	P	N	D	V	K	I	E	I	A	Y	C	G	V	C	H	S	D	L	H	Q	V	R	S	E	W	A	G	T	V	Y	P	C	V	P	G	H	E	I	V	G	R	V	V	A	V	G	D	Q	V	E	K	Y	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	C	K	A	A	V	A	W	E	A	G	K	P	L	S	I	E	E	I	E	V	A	P	P	K	A	H	E	V	R	I	K	I	I	A	T	A	V	C	H	T	D	A	Y	T	L	S	G	A	D	P	E	G	C	F	P	V	I	L	G	H	E	G	A	G	I	V	E	S	V	G	E	G	V	T	K	L	K	A
Template Known Secondary structure									B		S	T	T	S														T	T																					T			T	T			S	S	B															T	T			S			T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.														120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	L	V	G	V	G	C	I	V	D	S	C	K	H	C	E	E	C	E	D	G	L	E	N	Y	C	D	H	M	T	G	T	Y	N	S	P	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	P	G	H	T	L	G	G	Y	S	Q	Q	I	V	V	H	E	R	Y	V	L	R	I	R	H	P	Q
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.
Template Sequence		G	D	T	V	I	P	L	Y	I	P	Q	.	C	G	E	C	K	F	C	L	N	P	K	T	N	L	C	Q	K	I	R	V	T	Q	G	K	G	L	M	P	D	G	T	S	R	F	T	C	K	G	K	T	I	L	H	Y	M	G	T	S	T	F	S	E	Y	T	V	V	A	D	I	S	V	A	K	I	D	P	L	A
Template Known Secondary structure		T							S	S			.		S	S	S	T	T	T	T		T	T						T	T						T	T			T	T	S			S				T	T				B			T	T	T			S	B	S						G	G	G						T	T	S
Template Predicted Secondary structure													.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		E	Q	L	A	A	V	A	P	L	L	C	A	G	I	T	T	Y	S	P	L	R	H	W	Q	A	G	P	G	K	K	V	G	V	V	G	I	G	G	L	G	H	M	G	I	K	L	A	H	A	M	G	A	H	.	V	V	A	F	T	T	S	E	A	K	R	E	A	A	K	A	L	G	A	D	E	V	V	N	S	R
Query Conservation																																																							.
Alig confidence																																																							.
Template Conservation
Template Sequence		P	L	D	K	V	C	L	L	G	C	G	I	S	T	G	Y	G	A	A	V	N	T	A	K	L	E	P	G	S	V	C	A	V	F	G	L	G	G	V	G	L	A	V	I	M	G	C	K	V	A	G	A	S	R	I	I	G	V	D	I	N	K	D	K	F	A	R	A	K	E	F	G	A	T	E	C	I	N	P	Q
Template Known Secondary structure							G	G	G	G	T											T	T	T				T	T									S													T	T		S							S		G	G	G								T		S					G	G
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		227	.	.	230	.							.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.				.
Predicted Secondary structure							.	.	.	.	.	.																																																		.																.	.	.
Query SS confidence							.	.	.	.	.	.																																																		.																.	.	.
Query Sequence		N	A	D	E	M	.	.	.	.	.	.	A	A	H	L	K	S	F	D	F	I	L	N	T	V	A	A	P	H	N	L	D	D	F	T	T	L	L	K	R	D	G	T	M	T	L	V	G	A	P	A	T	P	H	K	S	P	E	V	F	.	N	L	I	M	K	R	R	A	I	A	G	S	M	I	G	.	.	.	G
Query Conservation							.	.	.	.	.	.																																																		.																.	.	.
Alig confidence							.	.	.	.	.	.																																																		.																.	.	.
Template Conservation
Template Sequence		D	F	S	K	P	I	Q	E	V	L	I	E	M	T	D	G	G	V	D	Y	S	F	E	C	I	G	N	V	K	V	M	R	A	A	L	E	A	C	H	K	G	W	G	V	S	V	V	V	G	V	A	A	S	G	E	E	I	A	T	R	P	F	Q	L	V	T	G	R	T	W	K	G	T	A	F	G	G	W	K	S
Template Known Secondary structure		G		S	S											T	S		B	S						S												T	B		T	T	T							S				T	T							T					T	T							S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.				.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		I	P	E	T	Q	E	M	L	D	F	C	A	E	H	G	I	V	A	.	.	.	D	I	E	M	I	R	A	D	Q	I	N	E	A	Y	E	R	M	L	R	G	D	V	K	Y	R	F	V	I	D	N
Query Conservation																				.	.	.
Alig confidence																				.	.	.																							.
Template Conservation																																													.
Template Sequence		V	E	S	V	P	K	L	V	S	E	Y	M	S	K	K	I	K	V	D	E	F	V	T	H	N	L	S	F	D	E	I	N	K	A	F	E	L	M	H	S	G	K	S	.	I	R	T	V	V	K	I
Template Known Secondary structure														T	T	S	S			G	G	G							G	G	G										T	T			.	S
Template Predicted Secondary structure																																													.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.		.	.	.	370	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions