Job Description P06610 Confidence 99.87% Date Thu Jan 5 10:59:10 GMT 2012 Rank 34 Aligned Residues 129 % Identity 16% Template c3razA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin-related protein; PDBTitle: the crystal structure of thioredoxin-related protein from neisseria2 meningitidis serogroup b Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		I	D	G	E	V	T	T	L	E	K	F	A	G	N	V	L	L	I	V	N	V	A	S	K	C	G	.	L	T	P	Q	Y	E	Q	L	E	N	I	Q	K	A	W	V	D	R	G	F	M	V	L	G	F	P	C	N	Q	F	L	E	Q	E	P	G	S	D	E	E	I	K	T	Y	C	T	T	T	W	G	V	T	F
Query Conservation																												.
Alig confidence																												.																												.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.
Template Sequence		K	D	N	T	P	Q	S	L	Q	S	L	K	A	P	V	R	I	V	N	L	W	A	T	W	C	G	P	C	R	K	E	X	P	A	X	S	K	W	Y	K	A	Q	K	K	G	S	V	D	X	V	G	I	A	L	.	.	.	.	.	.	.	.	.	D	T	S	D	N	I	G	N	F	L	K	Q	T	P	V	S	Y
Template Known Secondary structure		T	T						G	G	G			S	S									T	T																	T	S		T	T	T								S	.	.	.	.	.	.	.	.	.	S												S			S	S
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.										.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	F	S	K	I	E	V	N	G	E	G	R	H	P	L	Y	Q	K	L	I	A	A	A	P	T	A	V	A	P	E	E	S	G	F	Y	A	R	M	V	S	K	G	R	A	P	L	Y	P	D	D	I	L	W	N	F	E	K	F	L	V	G	R	D	G	K	V	I	Q	R	F	S	P	D	M	T	P	E	D	P
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template Sequence		P	I	W	R	Y	T	G	A	N	S	R	N	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	X	K	T	Y	G	N	T	V	G	V	L	P	F	T	V	V	E	A	P	K	C	G	Y	R	Q	T	I	T	G	E	V	N	E	.	.	K
Template Known Secondary structure									S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	T			S			S	S							T	T	T	T							S					.	.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.																																.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.
		172	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	M	E	S	I	K	L	A	L	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	T	D	A	V	K	L	A	H	S	K
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions