Job Description P06610 Confidence 98.75% Date Thu Jan 5 10:59:10 GMT 2012 Rank 107 Aligned Residues 114 % Identity 10% Template c3hypB_ PDB info PDB header:electron transport Chain: B: PDB Molecule:thioredoxin; PDBTitle: crystal structure of bacteroides fragilis trxp_s105g mutant Resolution 2.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	D	S	I	L	T	T	V	V	K	D	I	D	G	E	V	T	T	L	E	K	F	A	G	N	V	L	L	I	V	N	V	A	S	K	C	G	L	T	P	Q	Y	E	Q	L	E	N	I	Q	K	A	W	V	D	R	G	F	M	V	L	G	F	P	C	N	Q	F	L	E	Q	E	P	G	S	D	E	E	I	K
Query Conservation
Alig confidence																																																																				.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.
Template Sequence		L	T	R	A	E	F	L	K	K	I	A	D	Y	E	N	H	S	K	E	W	K	Y	L	G	D	K	P	A	I	V	D	F	Y	A	D	W	C	G	P	C	K	M	V	A	P	I	L	E	E	L	S	K	E	Y	A	G	K	I	Y	I	Y	K	V	N	V	D	.	.	.	.	.	.	.	.	K	E	P	E	L	A
Template Known Secondary structure											T															S	S									T	T		S																T	T	T	T								T	T	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.									.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	C	T	T	T	W	G	V	T	F	P	M	F	S	K	I	E	V	N	G	E	G	R	H	P	L	Y	Q	K	L	I	A	A	A	P	T	A	V	A	P	E	E	S	G	F	Y	A	R	M	V	S	K	G	R	A	P	L	Y	P	D	D	I	L	W	N	F	E	K	F	L	V	G	R	D	G	K	V	I	Q
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Sequence		R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	I	Q	G	I	P	T	I	W	F	V	.	P	M	K	G	E	P	Q
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T			S	S	S						.		S	S	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template SS confidence
		99	100																																																											.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	S	P	D	M	T	P	E	D	P	I	V	M	E	S	I	K	L	A	L	A	K
Query Conservation
Alig confidence										.	.
Template Conservation										.	.
Template Sequence		V	N	M	G	A	L	S	K	.	.	E	Q	L	K	G	Y	I	D	K	V	L	L	K
Template Known Secondary structure					S					.	.										T	T	S
Template Predicted Secondary structure										.	.
Template SS confidence
		120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions