Job Description P06610 Confidence 96.87% Date Thu Jan 5 10:59:10 GMT 2012 Rank 197 Aligned Residues 152 % Identity 11% Template c3feuA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative lipoprotein; PDBTitle: crystal structure of dsba-like thioredoxin domain vf_a0457 from vibrio2 fischeri Resolution 1.76 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.										.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.
Query Sequence		G	N	V	L	L	I	V	N	V	A	S	K	C	G	L	T	P	Q	Y	E	Q	L	E	N	I	Q	K	A	W	V	D	R	G	F	M	V	L	G	F	P	C	N	Q	F	L	E	Q	E	P	G	S	D	E	E	I	K	T	Y	C	T	T	T	W	G	V	T	F	P	M	F	.	.	.	.	.	.	.	.	.	S
Query Conservation																																																																								.	.	.	.	.	.	.	.	.
Alig confidence																						.	.																																																	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.
Template Sequence		G	X	A	P	V	T	E	V	F	A	L	S	C	G	H	C	R	N	X	E	.	.	N	F	L	P	V	I	S	Q	E	A	G	T	D	I	G	K	X	H	I	T	F	N	Q	S	A	H	I	A	S	X	F	Y	Y	A	A	E	X	Q	V	D	G	A	P	D	H	A	F	X	E	D	L	F	A	A	T	Q	X	G
Template Known Secondary structure					S							T	T								G	.	.	G	G									T	S									S	S	S														T	T	S	S	S	S														T
Template Predicted Secondary structure																						.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																																	.	.	.
Query SS confidence																																	.	.	.
Query Sequence		K	I	E	V	N	G	E	G	R	H	P	L	Y	Q	K	L	I	A	A	A	P	T	A	V	A	P	E	E	S	G	F	.	.	.	Y	A	R	M	V	S	K	G	R	A	P	L	Y	P	D	D	I	L	W	N	F	E	K	F	L	V	G	R	D	G	K	V	I	Q	R	F	S	P	D	M	T	P	E	D	P	I
Query Conservation																																	.	.	.
Alig confidence																																	.	.	.																										.	.	.												.	.
Template Conservation																																																													.	.	.												.	.
Template Sequence		E	G	T	T	L	T	E	Q	Q	E	A	Y	S	K	A	F	T	S	R	G	L	V	S	P	Y	D	F	N	E	E	Q	R	D	T	L	I	K	K	V	D	N	A	K	X	L	S	E	K	S	G	I	S	S	V	P	T	F	V	V	.	.	.	N	G	K	Y	N	V	L	I	G	G	H	.	.	D	D	P	K	Q
Template Known Secondary structure		T	T	S															T	T	T				G	G	G																								T			S	S	S					.	.	.	T	T	T					G	G	G		.	.	S	S
Template Predicted Secondary structure																																																													.	.	.												.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.				.	.	.	.	160	.	.	.	.	.	.			.	.	.	170	.
		173	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	E	S	I	K	L	A	L	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	D	T	I	R	Y	L	L	E	K
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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