Job Description P06610 Confidence 99.89% Date Thu Jan 5 10:59:10 GMT 2012 Rank 28 Aligned Residues 158 % Identity 12% Template c2k6vA_ PDB info PDB header:electron transport Chain: A: PDB Molecule:putative cytochrome c oxidase assembly protein; PDBTitle: solution structures of apo sco1 protein from thermus2 thermophilus Resolution UNK

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.
Query SS confidence																																							.	.
Query Sequence		Q	D	S	I	L	T	T	V	V	K	D	I	D	G	E	V	T	T	L	E	K	F	A	G	N	V	L	L	I	V	N	V	A	S	K	C	G	.	.	L	T	P	Q	Y	E	Q	L	E	N	I	Q	K	A	W	V	D	R	G	F	M	V	L	G	F	P	C	N	Q	F	L	E	Q	E	P	G	S	D	E	E	I
Query Conservation																																							.	.
Alig confidence																.																							.	.																													.	.
Template Conservation																.																																																					.	.
Template Sequence		N	P	K	P	V	D	F	A	L	E	G	P	Q	G	.	P	V	R	L	S	Q	F	Q	D	K	V	V	L	L	F	F	G	F	T	R	C	P	D	V	C	P	T	T	L	L	A	L	K	R	A	Y	E	K	L	P	P	K	A	Q	E	R	V	Q	V	I	F	V	.	.	S	V	D	P	E	R	D	P	P	E	V
Template Known Secondary structure													S	S	S	.				G	G	G	S	T	T	S									T	T		S	S														T	T	S						T	T							.	.		S		T	T	T
Template Predicted Secondary structure																.																																																					.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.	80	.	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	Y	C	T	T	T	W	G	V	T	F	P	M	F	S	K	I	E	V	N	G	E	G	R	H	P	L	Y	Q	K	L	I	A	A	A	P	T	A	V	A	P	E	E	S	G	F	Y	A	R	M	V	S	K	G	R	A	P	L	Y	P	D	D	I	L	W	N	F	E	K	F	L	V	G	R	D	G	K	V	I
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	R	Y	A	K	A	F	H	P	S	F	L	G	L	S	G	S	P	E	A	V	R	E	A	A	Q	T	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	Y	Q	K	S	Q	Y	R	G	P	G	E	Y	L	V	D	H	T	A	T	T	F	V	V	K	E	G	R	L	V
Template Known Secondary structure											T	T																			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T															T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.																				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	F	S	P	D	M	T	P	E	D	P	I	V	M	E	S	I	K	L	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	Y	S	P	D	K	A	E	A	T	D	R	V	V	A	D	L	Q	A	L	L
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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