Job Description P06610 Confidence 98.31% Date Thu Jan 5 10:59:10 GMT 2012 Rank 146 Aligned Residues 89 % Identity 19% Template c2j23A_ PDB info PDB header:immune protein Chain: A: PDB Molecule:thioredoxin; PDBTitle: cross-reactivity and crystal structure of malassezia2 sympodialis thioredoxin (mala s 13), a member of a new pan-3 allergen family Resolution 1.41 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		A	G	N	V	L	L	I	V	N	V	A	S	K	C	G	L	T	.	P	Q	Y	E	Q	L	E	N	I	Q	K	A	W	V	D	R	G	F	M	V	L	G	F	P	C	N	Q	F	L	E	Q	E	P	G	S	D	E	E	I	K	T	Y	C	T	T	T	W	G	V	T	F	P	M	F	S	K	I	E	V	N	G	E
Query Conservation																			.
Alig confidence																			.																											.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	D	K	V	V	V	I	D	F	W	A	T	W	C	G	P	C	K	M	I	G	P	V	F	E	K	I	S	D	T	P	A	G	D	K	V	G	F	Y	K	V	D	V	D	.	.	.	.	.	.	.	.	E	Q	S	Q	I	A	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S	S									T	T		S	T													T	S	T					S							T	T	.	.	.	.	.	.	.	.	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60									.	.	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	H	P	L	Y	Q	K	L	I	A	A	A	P	T	A	V	A	P	E	E	S	G	F	Y	A	R	M	V	S	K	G	R	A	P	L	Y	P	D	D	I	L	W	N	F	E	K	F	L	V	G	R	D	G	K	V	I	Q	R	F	S	P	D	M	T	P	E	D	P	I	V	M	E	S	I	K	L	A	L	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.												.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.												.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	I	R	A	M	P	T	F	V	F	F	.	K	N	G	Q	K	I	D	T	V	V	G	.	.	.	A	D	P	S	K	L	Q	A	A	I	T	Q	H	S	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T			S	S	S						.		T	T								S	.	.	.	S													T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.												.	.	.
Template SS confidence
																																								69	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.				.	.	.	.	.	.	.	.	100	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions