Job Description P24230 Confidence 96.95% Date Thu Jan 5 11:41:25 GMT 2012 Rank 202 Aligned Residues 161 % Identity 9% Template c3te6A_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:regulatory protein sir3; PDBTitle: crystal structure of the s. cerevisiae sir3 aaa+ domain Resolution 2.80 Å

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		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.							320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.
Query Sequence		G	A	Q	A	R	V	V	A	E	I	E	R	D	M	A	L	D	V	P	M	M	R	L	V	Q	G	D	V	G	S	G	K	T	L	V	A	A	L	A	A	L	R	A	I	A	H	G	K	Q	.	.	.	.	.	.	V	A	L	M	A	P	T	E	L	L	A	E	Q	H	A	N	N	F	R	N	W	F	A	P	L
Query Conservation																																																			.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.
Template Conservation
Template Sequence		E	D	F	T	R	I	F	L	P	I	Y	D	S	L	X	S	S	Q	N	K	L	F	Y	I	T	N	A	D	D	S	T	K	F	Q	L	V	N	D	V	X	D	E	L	I	T	S	S	A	R	K	E	L	P	I	F	D	Y	I	H	I	D	A	L	E	L	X	D	A	L	Y	E	K	I	W	F	A	I	S	K	E
Template Known Secondary structure																	T	T												S																	T	T	T	T	T	S	S										T	T															S
Template Predicted Secondary structure
Template SS confidence
		554	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.		.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		G	I	E	V	G	W	L	A	G	K	Q	K	G	K	A	R	L	A	Q	Q	E	A	I	A	S	G	Q	V	Q	M	I	V	G	T	H	A	I	F	Q	E	Q	V	Q	F	N	G	L	A	L	V	I	I	D	E	Q	H	R	F	.	G	V	H	Q	R	L	A	L	W	E	K	G	Q	Q	Q	G	F	H	P	H	Q
Query Conservation																																																												.
Alig confidence		.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation		.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	N	G	D	I	S	L	E	A	L	N	F	Y	I	T	N	V	P	K	A	K	K	R	K	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	L	I	Q	N	P	E	N	L	L	S	E	K	I	L	Q	Y	F	E	K	W	I	S	S	K	N	S	K	L	S	I
Template Known Secondary structure		.	.	.	.	.	.	.																S		G	G	G	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	S	S			T													S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
									636	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660																		.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.
		424	.	.	.	.	.	430	.			.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		L	I	M	T	A	T	P	I	.	.	P	R	T	L	A	M	T	A	Y	A	D	L	D	T	S	V	I	D	E	L	P	P	G	R
Query Conservation										.	.
Alig confidence										.	.
Template Conservation
Template Sequence		I	C	V	G	G	H	N	V	T	I	R	E	Q	I	N	I	X	P	S	L	K	A	H	F	T	E	I	K	L	N	K	V	D	K
Template Known Secondary structure							S	S									T						T	T
Template Predicted Secondary structure
Template SS confidence
		694	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions