Job Description P24230 Confidence 89.69% Date Thu Jan 5 11:41:25 GMT 2012 Rank 419 Aligned Residues 102 % Identity 8% Template c3hgtA_ PDB info PDB header:transcription Chain: A: PDB Molecule:hda1 complex subunit 3; PDBTitle: structural and functional studies of the yeast class ii hda12 hdac complex Resolution 2.20 Å

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		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	R	T	D	I	I	D	R	V	H	H	A	C	I	T	E	G	R	Q	A	Y	W	V	C	T	L	I	E	E	S	E	L	L	E	A	Q	A	A	E	A	T	W	E	E	L	K	L	A	L	P	E	L	N	V	G	L	V	H	G	R	M	K	P	A	E	K	Q	A	V	M	A	S	F	K	Q	G	E	L	H
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.												.	.																									.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.												.	.																									.	.	.	.	.
Template Sequence		S	G	K	F	S	V	L	R	D	L	I	N	L	V	Q	E	Y	E	T	E	T	A	I	V	C	R	P	G	R	T	.	.	.	.	.	.	.	.	M	D	L	L	E	A	L	L	L	G	N	.	.	K	V	H	I	K	R	Y	D	G	H	S	I	D	F	S	C	T	V	H	L	F	S	S	E	.	.	.	.	.
Template Known Secondary structure																T	T	S										S	T			.	.	.	.	.	.	.	.									T	T	S	.	.	S						S	S	S						S								S	S	.	.	.	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.												.	.																									.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.									.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		546	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	V	A	T	T	V	I	E	V	G	V	D	V	P	N	A	S	L	M	I	I	E	N	P	E	R	L	G	L	A	Q	L	H	Q	L	R	G	R
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	G	I	N	F	T	K	Y	P	I	K	S	K	A	R	F	D	M	L	I	C	L	D	T	T	V	D	T	S	Q	K	D	I	Q	Y	L	L	Q
Template Known Secondary structure		.	.				T	T	T	S						S			S						S	T	T			T	T	S
Template Predicted Secondary structure		.	.
Template SS confidence
				185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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