Return to main results Retrieve Phyre Job Id

Job DescriptionP24230
Confidence99.92%DateThu Jan 5 11:41:25 GMT 2012
Rank61Aligned Residues188
% Identity19%Templatec3fe2B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:probable atp-dependent rna helicase ddx5; PDBTitle: human dead-box rna helicase ddx5 (p68), conserved domain i in complex2 with adp
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   251........260........ .270.........280.........290.........300.........310........ .320.
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Query Sequence  LSANDTLKNKLLAALPFK. PTGAQARVVAEIERDMALDVPMMRLVQGDVGSGKTLVAALAALRAIAHGK. . . . . . . . QVA
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Template Sequence  ANFPANVMDVI. ARQNFTEPTAIQAQGWPVAL. . . . . . SGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICL
Template Known Secondary structure  T

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   99100......... 110.........120......... 130.........140.........150.........160.........170.
 
   322.......330.........340.........350.........360.........370.........380....... ..390......
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Query Sequence  LMAPTELLAEQHANNFRNWFAPLGIEVGWLAGKQKGKARLAQQEAIASGQVQMIVGTHAIFQEQVQ. . . . . FNGLALVII
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Template Sequence  VLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLER. . . . GVEICIATPGRLIDFLECGKTNLRRTTYLVL
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SSTT


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   172.......180.........190.........200.........210...... ...220.........230.........240.......
 
   397..400. ........410.........420.........430.........440.........
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Query Sequence  DEQHR. FGVHQRLALWEKGQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVID
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Template Sequence  DEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHIN
Template Known Secondary structure  TTTT
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   248.250.........260.........270.........280.........290.........300.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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