Job Description P24230 Confidence 99.76% Date Thu Jan 5 11:41:25 GMT 2012 Rank 108 Aligned Residues 194 % Identity 22% Template c3earA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:hera; PDBTitle: novel dimerization motif in the dead box rna helicase hera: form 1,2 partial dimer Resolution 2.30 Å

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		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	T	V	A	I	P	D	T	R	R	T	D	I	I	D	R	V	H	H	A	C	I	T	E	G	R	Q	A	Y	W	V	C	T	L	I	E	E	S	E	L	L	E	A	Q	A	A	E	A	T	W	E	E	L	K	L	A	L	P	E	L	N	V	G	L	V	H	G	R	M	K	P	A	E	K	Q	A	V	M	A
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.												.	.
Template Conservation																																								.	.	.	.	.	.	.	.												.	.
Template Sequence		Y	E	E	E	A	V	P	A	P	V	R	G	R	L	E	V	L	S	D	L	L	Y	V	A	S	P	D	R	A	M	V	F	T	R	T	K	A	E	.	.	.	.	.	.	.	.	T	E	E	I	A	Q	G	L	L	R	L	.	.	G	H	P	A	Q	A	L	H	G	D	L	S	Q	G	E	R	E	R	V	L	G
Template Known Secondary structure		S									G	G	G															S	S						S	S				.	.	.	.	.	.	.	.											T	.	.	T								T	T	S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.												.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250									.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		538	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	K	Q	G	E	L	H	L	L	V	A	T	T	V	I	E	V	G	V	D	V	P	N	A	S	L	M	I	I	E	N	P	E	R	L	G	L	A	Q	L	H	Q	L	R	G	R	V	G	R	G	A	V	A	S	H	C	V	L	L	Y	K	T	P	L	S	K	T	A	Q	I	R	L	Q	V	L	R	D	S	N
Query Conservation
Alig confidence																																					.																		.	.	.
Template Conservation																																					.																		.	.	.
Template Sequence		A	F	R	Q	G	E	V	R	V	L	V	A	T	D	V	A	A	R	G	L	D	I	P	Q	V	D	L	V	V	H	Y	R	L	P	D	.	R	A	E	A	Y	Q	H	R	S	G	R	T	G	R	G	G	R	.	.	.	V	V	L	L	Y	G	P	R	E	R	R	D	V	E	A	L	E	R	A	V	G	R	R	F
Template Known Secondary structure						T	S								T	T	T	T		S	S		S			B	S					S	S			S	.	S									T	T	B						.	.	.							G	G	G												T
Template Predicted Secondary structure																																					.																		.	.	.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.				.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
		618	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	F	V	I	A	Q	K	D	L	E	I	R	G	P	G	E	L	L	G	T	R	Q	T	G	N	A	E	F	K	V	A	D	L	L	R	D	Q	A	M	I	P	E	V	Q	R	L	A	R	H	I	H	E	R	Y	P	Q	Q	A	K	A	L	I	E	R	W	M	P	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	R	V	N	P	P	T	P	E	E	V	L	E	A	K	W	R	H	L	L	A	R	L	A	R	V	P	E	K	D	Y	R	L	Y	Q	D	F	A	G	R	L	F	A	E	G	R	V	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										S							T	T										T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																							362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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