Job Description P24230 Confidence 97.86% Date Thu Jan 5 11:41:25 GMT 2012 Rank 165 Aligned Residues 90 % Identity 22% Template c3dm3A_ PDB info PDB header:replication Chain: A: PDB Molecule:replication factor a; PDBTitle: crystal structure of a domain of a replication factor a2 protein, from methanocaldococcus jannaschii. northeast3 structural genomics target mjr118e Resolution 2.40 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.								.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120
Predicted Secondary structure																										.	.	.	.	.	.	.																																														.
Query SS confidence																										.	.	.	.	.	.	.																																														.
Query Sequence		H	L	Y	P	I	G	E	L	L	P	G	V	Y	A	T	V	E	G	E	V	L	N	C	N	.	.	.	.	.	.	.	I	S	F	G	G	R	R	M	M	T	C	Q	I	S	D	G	S	G	I	L	T	M	R	F	F	N	F	S	A	A	M	K	N	S	L	A	A	G	R	R	V	L	A	Y	G	.	E	A	K
Query Conservation																										.	.	.	.	.	.	.																																														.
Alig confidence																										.	.	.	.	.	.	.																											.	.																		.
Template Conservation																																																											.	.
Template Sequence		D	T	Y	N	I	G	E	L	S	P	G	M	T	A	T	F	E	G	E	V	I	S	A	L	P	I	K	E	F	K	R	A	D	G	S	I	G	K	L	K	S	F	I	V	R	D	E	T	G	S	I	R	V	T	L	W	D	.	.	N	L	T	D	I	D	V	G	R	G	D	Y	V	R	V	R	G	Y	I	R	E
Template Known Secondary structure						G	G	G			S	S																					T	T	S													T	T									G	.	.	G	G	G	G	S				T	T
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	K	Y	G	A	E	M	I	H	P	E	Y	R	V	Q	G	D	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Y	Y	G	G	L	E	C	T	A	N	Y	V	E	I	L	K	K	G	E
Template Known Secondary structure			T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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