Job Description P24230 Confidence 94.99% Date Thu Jan 5 11:41:25 GMT 2012 Rank 298 Aligned Residues 69 % Identity 28% Template c3cf1C_ PDB info PDB header:transport protein Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase; PDBTitle: structure of p97/vcp in complex with adp/adp.alfx Resolution 4.40 Å

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		271	.	.	.	.	.	.	.	.	280	.											.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.				.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.																																																			.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.																																																			.	.	.
Query Sequence		G	A	Q	A	R	V	V	A	E	I	E	.	.	.	.	.	.	.	.	.	.	R	D	M	A	L	D	V	P	M	M	R	L	V	Q	G	D	V	G	S	G	K	T	L	V	A	A	L	A	A	L	R	A	I	A	H	G	K	Q	V	A	L	M	A	P	T	E	L	L	A	E	.	.	.	Q	H	A	N	N	F
Query Conservation													.	.	.	.	.	.	.	.	.	.																																																			.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.																																	.	.	.																.	.	.
Template Conservation																																																							.	.	.
Template Sequence		R	K	Q	L	A	Q	I	K	E	M	V	E	L	P	L	R	H	P	A	L	F	K	A	I	G	V	K	P	P	R	G	I	L	L	Y	G	P	P	G	T	G	K	T	L	I	A	R	A	V	A	N	E	T	.	.	.	G	A	F	F	F	L	I	N	G	P	E	I	M	S	K	L	A	G	E	S	E	S	N	L
Template Known Secondary structure													T	T	T	T	T		T	T	T	T	T	T													S		T	T	S														.	.	.	T								T	T					S		T	T
Template Predicted Secondary structure																																																							.	.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.				.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		338	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	W	F	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	K	A	F	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		287	.	.	290	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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