Job Description P24230 Confidence 96.29% Date Thu Jan 5 11:41:25 GMT 2012 Rank 233 Aligned Residues 110 % Identity 15% Template c3bjuB_ PDB info PDB header:ligase Chain: B: PDB Molecule:lysyl-trna synthetase; PDBTitle: crystal structure of tetrameric form of human lysyl-trna2 synthetase Resolution 2.31 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.										.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.
Query Sequence		A	L	S	N	K	L	A	K	I	N	L	H	T	V	Q	D	L	L	L	H	L	P	L	R	Y	E	D	R	T	H	L	Y	P	I	G	E	.	.	.	.	.	.	.	.	.	L	L	P	G	V	Y	A	T	V	E	G	E	V	L	N	C	N	I	S	F	G	G	R	R	M	M	T	C	Q	I	S	D	G	S	G
Query Conservation																																						.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation															.	.	.	.	.	.	.																																												.	.
Template Sequence		Q	A	I	H	Q	L	K	V	N	G	E	D	P	.	.	.	.	.	.	.	Y	P	H	K	F	H	V	D	I	S	L	T	D	F	I	Q	K	Y	S	H	L	Q	P	G	D	H	L	T	D	I	T	L	K	V	A	G	R	I	H	A	K	R	A	.	.	S	G	G	K	L	I	F	Y	D	L	R	G	E	G	V
Template Known Secondary structure										T	T			S	.	.	.	.	.	.	.	S		S						S									S	T	T			T	T		B		T	T															.	.	S	S	S	S									T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.																																												.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.								.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		91	.	.	.	.	.	.	.	.	100								.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.																				.
Query SS confidence												.	.	.	.	.	.	.																				.
Query Sequence		I	L	T	M	R	F	F	N	F	S	.	.	.	.	.	.	.	A	A	M	K	N	S	L	A	A	G	R	R	V	L	A	Y	G	E	A	.	K	R	G	K	Y	G	A	E	M	I	H	P	E	Y	R	V	Q	G	D
Query Conservation												.	.	.	.	.	.	.																				.
Alig confidence												.	.	.	.	.	.	.																				.
Template Conservation
Template Sequence		K	L	Q	V	M	A	N	S	R	N	Y	K	S	E	E	E	F	I	H	I	N	N	K	L	R	R	G	D	I	I	G	V	Q	G	N	P	G	K	T	K	K	G	E	L	S	I	I	P	Y	E	I	T	L	L	S	P
Template Known Secondary structure									T	T	T	S	S														T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions