Job Description P24230 Confidence 98.07% Date Thu Jan 5 11:41:25 GMT 2012 Rank 157 Aligned Residues 177 % Identity 15% Template c3b9qA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:chloroplast srp receptor homolog, alpha subunit PDBTitle: the crystal structure of cpftsy from arabidopsis thaliana Resolution 1.75 Å

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		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.														.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	A	Q	R	F	H	A	Q	P	L	S	A	N	D	T	L	K	N	K	L	L	A	A	L	P	F	K	P	T	G	A	Q	A	R	V	V	A	E	I	E	R	D	M	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	P	M	M	R	L	V	Q	G	D	V	G	S	G	K	T	L	V	A	A
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	E	A	L	L	V	S	D	F	G	P	K	I	T	V	R	I	V	E	R	L	R	E	D	I	M	S	G	K	L	K	S	G	S	E	I	K	D	A	L	K	E	S	V	L	E	M	L	A	K	S	K	T	E	L	Q	L	G	F	R	K	P	A	V	I	M	I	V	G	V	N	G	G	G	K	T	T	S	L	G
Template Known Secondary structure								T	T																			T	T	S			S																						S					S	S	S										T	T	S
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.			.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		L	A	A	L	R	A	I	A	H	G	K	Q	V	A	L	M	A	.	.	P	T	E	L	L	A	E	Q	H	A	N	N	F	R	N	W	F	A	P	L	G	I	E	V	G	W	L	A	G	K	Q	K	G	K	A	R	L	A	Q	Q	E	A	I	A	S	G	Q	V	Q	M	I	V	G	T	H	A	I	F	Q	E	Q
Query Conservation																			.	.
Alig confidence																			.	.																		.	.	.																																.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.																																.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	A	H	R	L	K	N	E	G	T	K	V	L	M	A	A	G	D	T	F	R	A	A	A	S	D	Q	L	E	I	W	A	E	R	T	.	.	.	G	C	E	I	V	V	A	E	K	A	K	A	A	T	V	L	S	K	A	V	K	R	G	K	E	E	G	Y	D	V	V	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	T											S																.	.	.	T																									T	T		S			.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																						.	.	.																																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.				.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		386	.	.	.	390	.	.	.	.	.	.	.	.	.			400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.							.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.																		.	.	.	.	.	.
Query SS confidence																.	.																		.	.	.	.	.	.
Query Sequence		V	Q	F	N	G	L	A	L	V	I	I	D	E	Q	.	.	H	R	F	G	V	H	Q	R	L	A	L	W	E	K	G	Q	Q	.	.	.	.	.	.	Q	G	F	H	P	H	Q	L	I	M	T	A	T	P	I	P	R	T	L	A	M	T	A
Query Conservation																.	.																		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.						.	.																		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	L	C	D	T	S	G	R	L	H	T	N	Y	S	L	M	E	E	L	I	A	C	K	K	A	V	G	K	I	V	S	G	A	P	N	E	I	L	L	V	L	D	G	N	T	G	L	N	M	L	P	Q	A	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.								S	S																		T	T	S	T	T			S								G	G	G	G	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions