Job Description P24230 Confidence 99.78% Date Thu Jan 5 11:41:25 GMT 2012 Rank 104 Aligned Residues 151 % Identity 24% Template c3b6eA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:interferon-induced helicase c domain-containing protein 1; PDBTitle: crystal structure of human dech-box rna helicase mda5 (melanoma2 differentiation-associated protein 5), dech-domain Resolution 1.60 Å

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		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.							.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.
Query Sequence		P	F	K	P	T	G	A	Q	A	R	V	V	A	E	I	E	R	D	M	A	L	D	V	P	M	M	R	L	V	Q	G	D	V	G	S	G	K	T	L	V	A	A	L	A	A	L	R	A	I	A	H	G	.	.	.	.	.	.	K	Q	V	A	L	M	A	P	T	E	L	L	A	E	Q	H	A	N	N	F	R	N
Query Conservation																																																						.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.																															.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.
Template Sequence		E	L	Q	L	R	P	Y	Q	M	E	V	A	Q	P	A	L	.	.	.	.	.	.	E	G	K	N	I	I	I	C	L	P	T	G	S	G	K	T	R	V	A	V	Y	I	A	K	D	H	L	D	K	K	K	K	A	S	E	P	G	K	V	I	V	L	V	N	K	V	L	L	V	E	Q	L	F	R	K	E	F	Q
Template Known Secondary structure																		.	.	.	.	.	.	T	T								S																							T	T										S	S											T
Template Predicted Secondary structure																		.	.	.	.	.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320							.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.					.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.																								.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.																								.	.	.	.	.	.	.	.
Query Sequence		W	F	A	P	L	G	I	E	V	G	W	L	A	G	K	Q	K	G	K	A	R	L	A	Q	Q	E	A	I	A	S	G	Q	V	Q	M	I	V	G	T	H	A	I	F	Q	E	.	.	.	.	Q	V	Q	F	N	G	L	A	L	V	I	I	D	E	Q	H	R	F	G	V	H	Q	R	.	.	.	.	.	.	.	.
Query Conservation																																															.	.	.	.																								.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.														.	.	.	.																								.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.
Template Sequence		P	F	L	K	K	W	Y	R	V	I	G	L	S	G	L	K	I	S	F	P	E	V	V	K	S	.	.	.	.	.	.	.	C	D	I	I	I	S	T	A	Q	I	L	E	N	S	L	L	N	G	V	Q	L	S	D	F	S	L	I	I	I	D	E	C	V	Y	N	N	I	M	R	H	Y	L	M	Q	K	L	K	N
Template Known Secondary structure					T	T	T	S																			.	.	.	.	.	.	.		S																			G	G	G		S					T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.								.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	L	W	E	K	G	Q	Q	Q	G	F	H	P	H	Q	L	I	M	T	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	R	L	K	K	E	N	K	P	V	I	P	L	P	Q	I	L	G	L	T	A	S
Template Known Secondary structure							T	T
Template Predicted Secondary structure
Template SS confidence
		469	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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