Return to main results Retrieve Phyre Job Id

Job DescriptionP24230
Confidence93.17%DateThu Jan 5 11:41:25 GMT 2012
Rank358Aligned Residues113
% Identity18%Templatec2zpaB_
PDB info PDB header:transferaseChain: B: PDB Molecule:uncharacterized protein ypfi; PDBTitle: crystal structure of trna(met) cytidine acetyltransferase
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   268.270.........280.........290.........300.........310.........320.........330.........340.......
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  KPTGAQARVVAEIERDMALDVPMMRLVQGDVGSGKTLVAALAALRAIAHGKQVALMAPTELLAEQHANNFRNWFAPLGIE
Query Conservation   

  
  

  
  

        

 
 





 

  


     
 







  

 
    
  
    
  
Alig confidence 












....





























...


















...........
Template Conservation    
 

   
  
....        
















 
   ...  
 




  

 


 
...........
Template Sequence  APQPEQQQLLKQL. . . . XTXPPGVAAVTAARGRGKSALAGQLISRIA. . . GRAIVTAPAKASTDVLAQF. . . . . . . . . . .
Template Known Secondary structure  S

TTTS....



SS
TTSSTTTTSS...S



B
SS



T...........
Template Predicted Secondary structure 


....











...




...........
Template SS confidence 















































































   175....180....... ..190.........200.........210....... ..220.........230......
 
   348.350.........360.........370.........380.........390.........400.........410.........420.......
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  VGWLAGKQKGKARLAQQEAIASGQVQMIVGTHAIFQEQVQFNGLALVIIDEQHRFGVHQRLALWEKGQQQGFHPHQLIMT
Query Conservation 
 

 
             
  
   




   
   
    
 







      
  
             
 

Alig confidence  ......................














..

























.......







Template Conservation  ......................    
 
 


 
  ..     













 
  

 .......    



Template Sequence  . . . . . . . . . . . . . . . . . . . . . . AGEKFRFIAPDALLA. . SDEQADWLVVDEAAAIPAPLLHQLVS. . . . . . . RFPRTLLT
Template Known Secondary structure  ......................TTTS




TT..T



SSTTGGGS
.......SS
Template Predicted Secondary structure  ......................






..












.......


Template SS confidence 















































































   237..240.........250. ........260.........270....... ..280.....
 
   428.
Predicted Secondary structure 

Query SS confidence 

Query Sequence  AT
Query Conservation 

Alig confidence 

Template Conservation 

Template Sequence  TT
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   286.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions