Job Description P24230 Confidence 92.62% Date Thu Jan 5 11:41:25 GMT 2012 Rank 366 Aligned Residues 42 % Identity 19% Template c2zamA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:vacuolar protein sorting-associating protein 4b; PDBTitle: crystal structure of mouse skd1/vps4b apo-form Resolution 3.50 Å

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		271	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.									.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure											.										.	.	.	.	.	.	.	.
Query SS confidence											.										.	.	.	.	.	.	.	.
Query Sequence		G	A	Q	A	R	V	V	A	E	.	I	E	R	D	M	A	L	D	V	.	.	.	.	.	.	.	.	P	M	M	R	L	V	Q	G	D	V	G	S	G	K	T	L	V	A	A	L	A	A	L	R
Query Conservation											.										.	.	.	.	.	.	.	.
Alig confidence											.										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	G	A	K	E	A	L	K	E	A	V	I	L	P	I	K	F	P	H	L	F	T	G	K	R	T	P	W	R	G	I	L	L	F	G	P	P	G	T	G	K	S	Y	L	A	K	A	V	A	T	E
Template Known Secondary structure												T							G	G	G	S		S	S					S							S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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