Job Description P24230 Confidence 99.88% Date Thu Jan 5 11:41:25 GMT 2012 Rank 67 Aligned Residues 185 % Identity 19% Template c2pl3A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx10; PDBTitle: human dead-box rna helicase ddx10, dead domain in complex with adp Resolution 2.15 Å

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		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.								.	.	.	.	.	320	.	.
Predicted Secondary structure																			.																																																.	.	.	.	.	.	.
Query SS confidence																			.																																																.	.	.	.	.	.	.
Query Sequence		L	S	A	N	D	T	L	K	N	K	L	L	A	A	L	P	F	.	K	P	T	G	A	Q	A	R	V	V	A	E	I	E	R	D	M	A	L	D	V	P	M	M	R	L	V	Q	G	D	V	G	S	G	K	T	L	V	A	A	L	A	A	L	R	A	I	.	.	.	.	.	.	.	A	H	G	K	Q	V	A	L
Query Conservation																			.																																																.	.	.	.	.	.	.
Alig confidence													.						.															.	.	.	.	.	.																												.	.	.	.	.	.	.
Template Conservation													.																					.	.	.	.	.	.
Template Sequence		F	P	L	S	K	K	T	L	K	G	L	.	Q	E	A	Q	Y	R	L	V	T	E	I	Q	K	Q	T	I	G	L	A	L	.	.	.	.	.	.	Q	G	K	D	V	L	G	A	A	K	T	G	S	G	K	T	L	A	F	L	V	P	V	L	E	A	L	Y	R	L	Q	W	T	S	T	D	G	L	G	V	L	I
Template Known Secondary structure		S											.			T	T			B														.	.	.	.	.	.	T	T									T	T	S																	T	T			G	G	G
Template Predicted Secondary structure													.																					.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.							.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.							.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.
Query Sequence		M	A	P	T	E	L	L	A	E	Q	H	A	N	N	F	R	N	W	F	A	P	L	G	I	E	V	G	W	L	A	G	K	Q	K	G	K	A	R	L	A	Q	Q	E	A	I	A	S	G	Q	V	Q	M	I	V	G	T	H	A	I	F	Q	E	.	.	.	.	.	.	Q	V	Q	F	N	G	L	A	L	V	I	I
Query Conservation																																																																.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.
Template Sequence		I	S	P	T	R	E	L	A	Y	Q	T	F	E	V	L	R	K	V	G	K	N	H	D	F	S	A	G	L	I	I	G	G	L	K	H	E	A	E	R	I	N	.	.	.	.	.	.	.	N	I	N	I	L	V	C	T	P	G	R	L	L	Q	H	M	D	E	T	V	S	F	H	A	T	D	L	Q	M	L	V	L
Template Known Secondary structure				S	S															T	T	T	S	S																		T	.	.	.	.	.	.	.	T		S																	S	S				T	T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.								.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		397	.	.	400	.		.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		D	E	Q	H	R	.	F	G	V	H	Q	R	L	A	L	W	E	K	G	Q	Q	Q	G	F	H	P	H	Q	L	I	M	T	A	T	P	I	P	R	T	L	A	M	T	A	Y	A	D	L	D	T	S	V	I	D
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		D	E	A	D	R	I	L	D	M	G	F	A	D	T	M	N	A	V	I	E	N	L	P	K	K	R	Q	T	L	L	F	S	A	T	Q	T	K	S	V	K	D	L	A	R	L	S	L	K	N	P	E	Y	V	W
Template Known Secondary structure		T	T							T	T	T										T	S		T	T	S							S	S												S		S	S
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions