Job Description P24230 Confidence 99.77% Date Thu Jan 5 11:41:25 GMT 2012 Rank 106 Aligned Residues 144 % Identity 17% Template c2p6nA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent rna helicase ddx41; PDBTitle: human dead-box rna helicase ddx41, helicase domain Resolution 2.60 Å

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		457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	T	T	V	A	I	P	D	T	R	R	T	D	I	I	D	R	V	H	H	A	C	I	T	E	G	R	Q	A	Y	W	V	C	T	L	I	E	E	S	E	L	L	E	A	Q	A	A	E	A	T	W	E	E	L	K	L	A	L	P	E	L	N	V	G	L	V	H	G	R	M	K	P	A	E	K	Q	A	V	M
Query Conservation
Alig confidence															.																										.	.	.	.	.	.	.	.												.	.
Template Conservation															.																										.	.	.	.	.	.	.	.												.	.
Template Sequence		D	V	I	Q	E	V	E	Y	V	K	E	E	A	.	K	M	V	Y	L	L	E	C	L	Q	K	T	P	P	P	V	L	I	F	A	E	K	K	A	D	.	.	.	.	.	.	.	.	V	D	A	I	H	E	Y	L	L	L	K	.	.	G	V	E	A	V	A	I	H	G	G	K	D	Q	E	E	R	T	K	A	I
Template Known Secondary structure			S									G	G	G	.										T	T	S		S							S					.	.	.	.	.	.	.	.												.	.	T								T	T	S
Template Predicted Secondary structure															.																										.	.	.	.	.	.	.	.												.	.
Template SS confidence
		407	.	.	410	.	.	.	.	.	.	.	.	.		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.									.	.	.	.	.	450	.	.	.	.	.			.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
		537	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	F	K	Q	G	E	L	H	L	L	V	A	T	T	V	I	E	V	G	V	D	V	P	N	A	S	L	M	I	I	E	N	P	E	R	L	G	L	A	Q	L	H	Q	L	R	G	R	V	G	R	G	A	V	A	S	H	C	V	L	L	Y	K	T	P	L	S	K	T	A	Q	I	R	L	Q	V	L	R	D
Query Conservation
Alig confidence																																						.															.	.	.
Template Conservation																																						.															.	.	.
Template Sequence		E	A	F	R	E	G	K	K	D	V	L	V	A	T	D	V	A	S	K	G	L	D	F	P	A	I	Q	H	V	I	N	Y	D	M	P	E	.	E	I	E	N	Y	V	H	R	I	G	R	T	G	C	.	.	.	T	G	I	A	T	T	F	I	N	K	A	C	D	E	S	V	L	M	D	L	K	A	L	L	L
Template Known Secondary structure							T	S		S										T	T							S					S	S			S	.	S									T	T	S			.	.	.										T	T	S
Template Predicted Secondary structure																																						.															.	.	.
Template SS confidence
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.		.	.	.	.	.	.	.	.	520	.	.	.	.	.				.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions