Job Description P24230 Confidence 99.86% Date Thu Jan 5 11:41:25 GMT 2012 Rank 77 Aligned Residues 188 % Identity 18% Template c2oxcA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx20; PDBTitle: human dead-box rna helicase ddx20, dead domain in complex2 with adp Resolution 1.30 Å

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		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.				.	320	.	.	.	.	.	.
Predicted Secondary structure																				.																																																			.	.	.
Query SS confidence																				.																																																			.	.	.
Query Sequence		L	S	A	N	D	T	L	K	N	K	L	L	A	A	L	P	F	K	.	P	T	G	A	Q	A	R	V	V	A	E	I	E	R	D	M	A	L	D	V	P	M	M	R	L	V	Q	G	D	V	G	S	G	K	T	L	V	A	A	L	A	A	L	R	A	I	A	H	G	K	.	.	.	Q	V	A	L	M	A	P	T
Query Conservation																				.																																																			.	.	.
Alig confidence														.						.														.	.	.	.	.	.																																.	.	.
Template Conservation														.																				.	.	.	.	.	.
Template Sequence		L	L	L	S	R	P	V	L	E	G	L	R	.	A	A	G	F	E	R	P	S	P	V	Q	L	K	A	I	P	L	G	R	.	.	.	.	.	.	C	G	L	D	L	I	V	Q	A	K	S	G	T	G	K	T	C	V	F	S	T	I	A	L	D	S	L	V	L	E	N	L	S	T	Q	I	L	I	L	A	P	T
Template Known Secondary structure		G	T											.		T	T			S														.	.	.	.	.	.	T	T									T	T	S	S															T	T	S		S								S	S
Template Predicted Secondary structure														.																				.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.							.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.						.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure																																																												.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.
Query Sequence		E	L	L	A	E	Q	H	A	N	N	F	R	N	W	F	A	P	L	G	I	E	V	G	W	L	A	G	K	Q	K	G	K	A	R	L	A	Q	Q	E	A	I	A	S	G	Q	V	Q	M	I	V	G	T	H	A	I	F	Q	E	.	.	.	.	.	Q	V	Q	F	N	G	L	A	L	V	I	I	D	E	Q	H	R
Query Conservation																																																												.	.	.	.	.
Alig confidence																																										.	.	.	.															.	.	.	.	.
Template Conservation																																										.	.	.	.
Template Sequence		R	E	I	A	V	Q	I	H	S	V	I	T	A	I	G	I	K	M	E	G	L	E	C	H	V	F	I	G	G	T	P	L	S	Q	D	K	T	R	L	K	.	.	.	.	K	C	H	I	A	V	G	S	P	G	R	I	K	Q	L	I	E	L	D	Y	L	N	P	G	S	I	R	L	F	I	L	D	E	A	D	K
Template Known Secondary structure																T	T	T	S	T	T								T	T	S									T	T	.	.	.	.	S		S															T	T	S	S		G	G	G							S	S
Template Predicted Secondary structure																																										.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.					180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		402	.	.	.			.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		F	G	V	H	.	.	Q	R	L	A	L	W	E	K	G	Q	Q	Q	G	F	H	P	H	Q	L	I	M	T	A	T	P	I	P	R	T	L	A	M	T	A	Y	A	D	L	D	T	S	V	I	D
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		L	L	E	E	G	S	F	Q	E	Q	I	N	W	I	Y	S	S	L	P	A	S	K	Q	M	L	A	V	S	A	T	Y	P	E	F	L	A	N	A	L	T	K	Y	M	R	D	P	T	F	V	R
Template Known Secondary structure				S	T	T	S	S											S		S	S								S											T	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions