Job Description P24230 Confidence 99.85% Date Thu Jan 5 11:41:25 GMT 2012 Rank 79 Aligned Residues 186 % Identity 16% Template c2gxqA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:heat resistant rna dependent atpase; PDBTitle: hera n-terminal domain in complex with amp, crystal form 1 Resolution 1.20 Å

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		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.							.	.	.	.	.	320	.	.	.
Predicted Secondary structure																				.																																															.	.	.	.	.	.
Query SS confidence																				.																																															.	.	.	.	.	.
Query Sequence		L	S	A	N	D	T	L	K	N	K	L	L	A	A	L	P	F	K	.	P	T	G	A	Q	A	R	V	V	A	E	I	E	R	D	M	A	L	D	V	P	M	M	R	L	V	Q	G	D	V	G	S	G	K	T	L	V	A	A	L	A	A	L	R	A	I	.	.	.	.	.	.	A	H	G	K	Q	V	A	L	M
Query Conservation																				.																																															.	.	.	.	.	.
Alig confidence															.					.														.	.	.	.	.	.																												.	.	.	.	.	.
Template Conservation															.																			.	.	.	.	.	.
Template Sequence		F	P	L	K	P	E	I	L	E	A	L	H	G	.	R	G	L	T	T	P	T	P	I	Q	A	A	A	L	P	L	A	L	.	.	.	.	.	.	E	G	K	D	L	I	G	Q	A	R	T	G	T	G	K	T	L	A	F	A	L	P	I	A	E	R	L	A	P	S	Q	E	R	G	R	K	P	R	A	L	V	L
Template Known Secondary structure		S													.	T	T			S														.	.	.	.	.	.	T	T									T	T	S																				T	T				S
Template Predicted Secondary structure															.																			.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.							.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.						.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.
Query Sequence		A	P	T	E	L	L	A	E	Q	H	A	N	N	F	R	N	W	F	A	P	L	G	I	E	V	G	W	L	A	G	K	Q	K	G	K	A	R	L	A	Q	Q	E	A	I	A	S	G	Q	V	Q	M	I	V	G	T	H	A	I	F	Q	E	Q	V	Q	.	.	.	.	.	F	N	G	L	A	L	V	I	I	D	E
Query Conservation																																																																		.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.																		.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.
Template Sequence		T	P	T	R	E	L	A	L	Q	V	A	S	E	L	T	A	V	A	P	H	L	K	V	V	A	V	Y	G	G	T	G	Y	G	K	Q	K	E	A	L	L	R	.	.	.	.	.	.	G	A	D	A	V	V	A	T	P	G	R	A	L	D	Y	L	R	Q	G	V	L	D	L	S	R	V	E	V	A	V	L	D	E
Template Known Secondary structure			S	S																T	T	S							S	S	S		S										.	.	.	.	.	.			S																T	S	S			T	T		S						S
Template Predicted Secondary structure																																											.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.							120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		399	400	.		.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		Q	H	R	.	F	G	V	H	Q	R	L	A	L	W	E	K	G	Q	Q	Q	G	F	H	P	H	Q	L	I	M	T	A	T	P	I	P	R	T	L	A	M	T	A	Y	A	D	L	D	T	S	V	I	D
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		A	D	E	M	L	S	M	G	F	E	E	E	V	E	A	L	L	S	A	T	P	P	S	R	Q	T	L	L	F	S	A	T	L	P	S	W	A	K	R	L	A	E	R	Y	M	K	N	P	V	L	I	N
Template Known Secondary structure								T	T											T	S		T	T	S							S	S														S	S
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions