 |
Job Description | P24230 | Confidence | 98.65% | Date | Thu Jan 5 11:41:25 GMT 2012 |
Rank | 138 | Aligned Residues | 115 |
% Identity | 9% | Template | c1z5zB_ |
PDB info |
PDB header:hydrolase/recombination | Chain: B: PDB Molecule:helicase of the snf2/rad54 family; |
PDBTitle: sulfolobus solfataricus swi2/snf2 atpase c-terminal domain
|
Resolution | 2.00 Å |
|
 |
  |   |
465 | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | T | R | R | T | D | I | I | D | R | V | H | H | A | C | I | T | E | G | R | Q | A | Y | W | V | C | T | L | I | E | E | S | E | L | L | E | A | Q | A | A | E | A | T | W | E | E | L | K | L | A | L | P | E | L | N | V | G | L | V | H | G | R | M | K | P | A | E | K | Q | A | V | M | A | S | F | K | Q | G | E | L |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |
|   |
|
|
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |
|   |   |
|
|
|   |
|   |   |   |
|
|   |   |
|
|   |   |
|
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
Template Sequence |   |
R | S | G | K | M | I | R | T | M | E | I | I | E | E | A | L | D | E | G | D | K | I | A | I | F | T | Q | F | V | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
M | G | K | I | I | R | N | I | I | E | K | E | L | N | T | E | V | P | F | L | Y | G | E | L | S | K | K | E | R | D | D | I | I | S | K | F | Q | N | N | P | S |
Template Known Secondary structure |   |
G |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  | S |
|  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
729 | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | . | . | . | . | . | . | . | . |
  |
  |   |
545 | |
|
. | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
| . | . |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | . |
. |
L | L | V | A | T | T | V | I | E | V | G | V | D | V | P | N | A | S | L | M | I | I | E | N | P | E | R | L | G | L | A | Q | L | H | Q | L | R | G | R | V | G | R | G | A |
Query Conservation |   |
  | . | . |
|
|
|
|
|   |
|
|
|   |
|
|
|
|
|   |
|   |   |
|
|
|   |   |
|   |
|   |   |
|   |   |
|
|
|   |   |
|
|   |
|
|   |   |
Alig confidence |   |
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|   |   |
|   |
|   |   |   |
|
|
|
|   |   |
|   |   |
|
|   |   |
|   |   | . |
|
|
|   |   |   |   |   |   |
|   |
|
|   |   |   |   |
Template Sequence |   |
V | K | F | I | V | L | S | V | K | A | G | G | F | G | I | N | L | T | S | A | N | R | V | I | H | F | D | R | W | . |
W | N | P | A | V | E | N | V | I | V | H | K | L | I | S | V | G |
Template Known Secondary structure |   |
|
|  |  |  |  |  |
|
| T | T | B |
|
|
|
|
| T | T |
| S |  |  |  |  |
| S |
|
| . | B |
| T | T |
|
|
|  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
| . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . | . | . | . | 820 | . | . | . | . | . | . | . | . | |
. | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|