Job Description P24230 Confidence 96.61% Date Thu Jan 5 11:41:25 GMT 2012 Rank 215 Aligned Residues 88 % Identity 18% Template c1ynxA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:replication factor-a protein 1; PDBTitle: solution structure of dna binding domain a (dbd-a) of2 s.cerevisiae replication protein a (rpa) Resolution UNK

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		48	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.							.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.
Predicted Secondary structure													.																.	.	.	.	.	.																												.																.
Query SS confidence													.																.	.	.	.	.	.																												.																.
Query Sequence		T	H	L	Y	P	I	G	E	L	L	P	.	G	V	Y	A	T	V	E	G	E	V	L	N	C	N	I	.	.	.	.	.	.	S	F	G	G	R	R	M	M	T	C	Q	I	S	D	G	S	G	I	L	T	M	R	F	F	N	F	S	.	A	A	M	K	N	S	L	A	A	G	R	R	V	L	A	.	Y	G	E
Query Conservation													.																.	.	.	.	.	.																												.																.
Alig confidence													.																.	.	.	.	.	.																												.																.
Template Conservation
Template Sequence		R	P	I	F	A	I	E	Q	L	S	P	Y	Q	N	V	W	T	I	K	A	R	V	S	Y	K	G	E	I	K	T	W	H	N	Q	R	G	D	G	K	L	F	N	V	N	F	L	D	T	S	G	E	I	R	A	T	A	F	N	D	F	A	T	K	F	N	E	I	L	Q	E	G	K	V	Y	Y	V	S	K	A	K
Template Known Secondary structure				B			G	G	G			T	T	T																					S	S													T	T																			S		S	S	S						S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	R	G	K	Y	G	A	E	M	I	H	P	E	Y	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	P	A	K	P	Q	F	T	N	L	T	H	P	Y	E	L
Template Known Secondary structure							T	T	T	S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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