Job Description P24230 Confidence 95.10% Date Thu Jan 5 11:41:25 GMT 2012 Rank 290 Aligned Residues 121 % Identity 19% Template c1u9iA_ PDB info PDB header:circadian clock protein Chain: A: PDB Molecule:kaic; PDBTitle: crystal structure of circadian clock protein kaic with phosphorylation2 sites Resolution 2.80 Å

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		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	P	M	M	R	L	V	Q	G	D	V	G	S	G	K	T	L	V	A	A	L	A	A	L	R	A	I	A	H	G	K	Q	V	A	L	M	A	P	T	E	L	L	A	E	Q	H	A	N	N	F	R	N	W	F	A	P	L	G	I	E	V	G	W	L	A	G	K	Q	K	G	K	A	R	L	A	Q	Q	E	A
Query Conservation
Alig confidence																																													.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	K	D	S	I	I	L	A	T	G	A	T	G	T	G	K	T	L	L	V	S	R	F	V	E	N	A	C	A	N	K	E	R	A	I	L	F	A	Y	E	E	S	R	.	A	Q	L	L	R	N	A	Y	S	W	G	M	D	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	M
Template Known Secondary structure			S	S									T	T	S	S														T	T	T								S	S	S			.									T	T	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																													.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.																				.	.	.
		367	.	.	370	.	.	.	.	.	.	.	.	.										380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.						400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Query Sequence		I	A	S	G	Q	V	Q	M	I	V	G	T	H	.	.	.	.	.	.	.	.	.	A	I	F	Q	E	Q	V	Q	F	N	G	L	A	L	V	I	I	D	E	Q	.	.	.	.	.	H	R	F	G	V	H	Q	R	L	A	L	W	E	K	G	Q	Q	Q	G	F	H	P	H	Q	L	I	M	T
Query Conservation															.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation
Template Sequence		E	R	Q	N	L	L	K	I	V	C	A	Y	P	E	S	A	G	L	E	D	H	L	Q	I	I	K	S	E	I	N	D	F	K	P	A	R	I	A	I	D	S	L	S	A	L	A	R	G	V	S	N	N	A	F	R	Q	F	V	I	G	V	T	G	Y	A	K	Q	E	E	I	T	G	L	F	T
Template Known Secondary structure				T	T	S								G	G	G	S															T	T			S											T	S	S	S																			T	T
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions