Return to main results Retrieve Phyre Job Id

Job DescriptionP24230
Confidence97.78%DateThu Jan 5 11:41:25 GMT 2012
Rank168Aligned Residues133
% Identity16%Templatec1sxjD_
PDB info PDB header:replicationChain: D: PDB Molecule:activator 1 41 kda subunit; PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna)
Resolution2.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   272.......280.........290.........300.........310.........320.........330.........340.........350.
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Query Sequence  AQARVVAEIERDMALDVPMMRLVQGDVGSGKTLVAALAALRAIAHGKQVALMAPTELLAEQHANNFRNWFAPLGIEVGWL
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Template Sequence  AQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKEL. . . . . . . . . . . . . . . . . . . . . . . YGPDLMKSRILELNA
Template Known Secondary structure  S

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   41........50.........60.........70.........80.. .......90.......
 
   352.......360.........370.........380.........390.........400.........410.........420.........430
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Query Sequence  AGKQKGKARLAQQEAIASGQVQMIVGTHAIFQEQVQFNGLALVIIDEQHRFGVHQRLALWEKGQQQGFHPHQLIMTATP
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Template Sequence  SDERGISIVREKVKNFARLTVSKPS. . . KHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYV
Template Known Secondary structure  SS


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   98.100.........110.........120.. .......130.........140.........150.........160.........170...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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