Job Description P0AAJ1 Confidence 100.00% Date Thu Jan 5 11:13:03 GMT 2012 Rank 3 Aligned Residues 187 % Identity 34% Template c2vpyB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nrfc protein; PDBTitle: polysulfide reductase with bound quinone inhibitor,2 pentachlorophenol (pcp) Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	T	Q	Y	G	F	F	I	D	S	S	R	C	T	G	C	K	T	C	E	L	A	C	K	D	F	K	D	L	G	P	E	V	S	F	R	R	I	Y	E	Y	A	G	G	D	W	Q	E	D	N	G	V	W	H	Q	N	V	F	A	Y	Y	L	S	I	S	C	N	H	C	D	D	P	A	C	T	K	V	C	P
Query Conservation
Alig confidence					.																																												.	.	.	.	.	.	.	.
Template Conservation					.																																												.	.	.	.	.	.	.	.
Template Sequence		M	P	R	.	Y	A	M	A	I	D	L	S	L	C	V	G	C	A	A	C	A	V	A	C	K	M	E	N	E	V	P	P	G	V	F	N	L	W	I	R	E	R	E	V	G	E	Y	.	.	.	.	.	.	.	.	P	N	L	V	V	E	F	R	P	E	Q	C	L	H	C	E	N	P	P	C	V	P	V	C	P
Template Known Secondary structure					.							T	T	T															T				T	T			S											T	.	.	.	.	.	.	.	.	T	S														S	S		T	T	T	T	T		S
Template Predicted Secondary structure					.																																												.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.		.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.									.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	A	M	H	K	R	E	D	G	F	V	V	V	D	E	D	V	C	I	G	C	R	Y	C	H	M	A	C	P	Y	G	A	P	Q	Y	N	A	E	K	G	H	M	T	K	C	D	G	C	Y	S	R	V	A	E	G	K	Q	P	I	C	V	E	S	C	P	L	R	A	L	E	F	G	P	I	E	E	L	R	Q
Query Conservation
Alig confidence																																									.
Template Conservation																																									.
Template Sequence		T	G	A	S	Y	Q	T	K	D	G	L	V	L	V	D	P	K	K	C	I	A	C	G	A	C	I	A	A	C	P	Y	D	A	R	Y	L	H	P	A	.	G	Y	V	S	K	C	T	F	C	A	H	R	L	E	K	G	K	V	P	A	C	V	E	T	C	P	T	Y	C	R	T	F	G	D	L	E	D	P	E	S
Template Known Secondary structure		S	S						T	T	S						T	T	T												T	T							T	T	.	S	S						T	T						T	T								S		T	T								T	T		T	T	S
Template Predicted Secondary structure																																									.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	H	G	T	L	A	A	V	A	P	L	P	R	A	H	F	T	K	P	N	I	V	I	K	P	N	A	N	S	R	P	T	G	D	T	T	G	Y	L	A	N	P	E	E	V
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.
Template Sequence		P	V	A	K	A	L	K	A	A	E	R	.	.	.	.	.	.	.	.	V	D	V	L	R	P	E	Q	G	T	R	P	K	L	F	Y	L	N	A	P	S	K	K	G	L	T
Template Known Secondary structure											S		.	.	.	.	.	.	.	.				S	S	T	T	S	S				S					S		S	S	T	T		S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.									.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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