Job Description P0AAJ1 Confidence 14.91% Date Thu Jan 5 11:13:03 GMT 2012 Rank 67 Aligned Residues 115 % Identity 23% Template c2a91A_ PDB info PDB header:signaling protein,transferase,membrane p Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-2; PDBTitle: crystal structure of erbb2 domains 1-3 Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	Q	Y	G	F	F	I	D	S	S	R	C	T	G	C	K	T	C	E	L	A	C	K	D	F	K	D	L	G	P	E	V	S	F	R	R	I	Y	E	Y	A	G	G	D	W	Q	E	D	N	G	V	W	H	Q	N	V	F	A	Y	Y	L	S	I	S	C	N	H	C	D	D	P	A	C	T	K	V	C	P	S
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	Q	L	A	L	T	L	I	D	T	N	R	S	R	A	C	H	P	C	S	P	M	C	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	R	C	W	G	E	S	S	E	D	C	Q	S	L	T	R	T	V	C	A	G	G	C	A	R
Template Known Secondary structure			T	T										S	S							T	T		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S		B	S	S	S	S	T	T		B				S	S	T	T		S	T	T		S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.																															180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		82	.	.	.	.	.	.	.									90	.	.	.	.	.	.	.	.	.	100	.	.	.							.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.															.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.															.	.	.	.	.	.
Query Sequence		G	A	M	H	K	R	E	D	.	.	.	.	.	.	.	.	G	F	V	V	V	D	E	D	V	C	I	G	C	R	.	.	.	.	.	.	Y	C	H	M	A	C	P	Y	G	A	P	Q	Y	N	A	E	K	G	H	M	T	K	C	D	G	C	Y	S	R	V	A	E	G	K	Q	P	I	C	V	E	S	C	P	L
Query Conservation										.	.	.	.	.	.	.	.															.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.															.	.	.	.	.	.																													.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.
Template Sequence		C	K	G	P	L	P	T	D	C	C	H	E	Q	C	A	A	G	C	T	G	P	K	H	S	D	C	L	A	C	L	H	F	N	H	S	G	I	C	E	L	H	C	P	A	L	V	T	Y	N	T	D	T	F	E	S	M	P	N	P	E	G	R	Y	T	.	.	.	.	.	F	G	A	S	C	V	T	A	C	P	Y
Template Known Secondary structure		B	S	S	S	S	G	G	G	B			T	T						S	S	S	S	T	T	S					S	S				T	T				S	S				S					T	T	T							T	T					.	.	.	.	.		T	T				S	S			T
Template Predicted Secondary structure																																																																		.	.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.						270	.	.	.	.	.	.	.	.	.	280
		148	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	Y	L	S
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		281	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions