Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGB3
Confidence85.06%DateThu Jan 5 11:28:39 GMT 2012
Rank220Aligned Residues43
% Identity5%Templated1ub9a_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.05

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   233......240.........250.........260.........270.......
Predicted Secondary structure 










Query SS confidence 












































Query Sequence  DERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKK
Query Conservation    


 

 
 
       
  


  



   
     


 
Alig confidence 















..


























Template Conservation     
  

  
     .. 
  


  
 

   

  
  

  
Template Sequence  NPVRLGIMIFLLPRRK. . APFSQIQKVLDLTPGNLDSHIRVLERN
Template Known Secondary structure  SS..TT

T
Template Predicted Secondary structure 



..




Template SS confidence 












































   15....20.........30 .........40.........50.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions