Job Description P0AGB3 Confidence 98.87% Date Thu Jan 5 11:28:39 GMT 2012 Rank 27 Aligned Residues 61 % Identity 28% Template d1s7oa_ SCOP info DNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors YlxM/p13-like Resolution 2.31

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		Q	A	A	N	R	L	T	D	A	M	Q	G	.	L	D	E	R	S	Q	D	I	I	R	A	R	W	L	D	E	D	N	K	S	T	L	Q	E	L	A	D	R	Y	G	V	S	A	E	R	V	R	Q	L	E	K	N	A	M	K	K	L	R	A	A	I	E
Query Conservation														.
Alig confidence														.																	.	.	.
Template Conservation																															.	.	.
Template Sequence		N	R	M	N	A	L	F	E	F	Y	A	A	L	L	T	D	K	Q	M	N	Y	I	E	L	Y	Y	A	D	D	.	.	.	Y	S	L	A	E	I	A	D	E	F	G	V	S	R	Q	A	V	Y	D	N	I	K	R	T	E	K	I	L	E	T	Y	E	M
Template Known Secondary structure												G	G	G	S														T		.	.	.											T
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.				.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions