Job Description P0AGB3 Confidence 99.40% Date Thu Jan 5 11:28:39 GMT 2012 Rank 13 Aligned Residues 86 % Identity 19% Template d1or7b2 SCOP info Sigma2 domain of RNA polymerase sigma factors Sigma2 domain of RNA polymerase sigma factors Sigma2 domain of RNA polymerase sigma factors Resolution 2.00

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	R	A	L	A	E	K	L	H	Y	H	G	D	L	E	A	A	K	T	L	I	L	S	H	L	R	F	V	V	H	I	A	R	N	Y	A	G	Y	G	L	P	Q	A	D	L	I	Q	E	G	N	I	G	L	M	K	A	V	R	R	F	N	P	E	V	G	V	R	L	V	S	F	A	V	H	W	I	K	A	E
Query Conservation
Alig confidence													.																												.																										.	.
Template Conservation													.																												.																										.	.
Template Sequence		T	D	Q	V	L	V	E	R	V	Q	K	.	G	D	Q	K	A	F	N	L	L	V	V	R	Y	Q	H	K	V	A	S	L	V	S	R	Y	V	P	S	.	G	D	V	P	D	V	V	Q	E	A	F	I	K	A	Y	R	A	L	D	S	F	R	G	D	S	.	.	A	F	Y	T	W	L	Y	R	I	A	V	N	T
Template Known Secondary structure												T	.	T																						T	T	S		G	.	G	G																G	G	G			S	S	S	.	.
Template Predicted Secondary structure													.																												.																										.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.
		113	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	H	E	Y	V	L	R	N	W	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	N	Y	L	V	A	Q	G	R
Template Known Secondary structure								T	T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions