 |
Job Description | P0AGB3 | Confidence | 47.70% | Date | Thu Jan 5 11:28:39 GMT 2012 |
Rank | 424 | Aligned Residues | 51 |
% Identity | 18% | Template | d1lfup_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| Homeodomain
|
Resolution | UNK |
|
  |   |
232 | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | |
. | 250 | . | . | |
|
|
|
. | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|
|
| . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | D | E | R | S | Q | D | I | I | R | A | R | W | L | D | E | D | . |
N | K | S | T | . |
. |
. |
. |
L | Q | E | L | A | D | R | Y | G | V | S | A | E | R | V | R | Q | L | E | K | N | A | M | K | K | L | R | A | A | I |
Query Conservation |   |
|   |   |
|
|
|   |
|
|   |
|   |
|   |   |   |   | . |   |   |   |
| . | . | . | . |   |   |
|
|
|   |   |
|
|
|
|   |   |   |
|   |   |   |   |   |
|
|
|   |
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |
|
|   |   |   |
|
|   |   |   |
|
|   |   |
|
|   |
|   |
|   |
|   |
|
|   |   |
Template Sequence |   |
F | N | K | Q | A | T | E | I | L | N | E | Y | F | Y | S | H | L | S | N | P | Y | P | S | E | E | A | K | E | E | L | A | K | K | S | G | I | T | V | S | Q | V | S | N | W | F | G | N | K | R | I | R | Y | K | K | N | I |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  |  |  |  |  | T | T | S | T | T | S |
| S |
|
|  |  |  |  |  |  |  |  |  |  |  | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|