 |
Job Description | P0AGB3 | Confidence | 97.60% | Date | Thu Jan 5 11:28:39 GMT 2012 |
Rank | 43 | Aligned Residues | 43 |
% Identity | 30% | Template | d1l3la1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| C-terminal effector domain of the bipartite response regulators
| GerE-like (LuxR/UhpA family of transcriptional regulators)
|
Resolution | 1.66 |
|
  |   |
232 | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | D | E | R | S | Q | D | I | I | R | A | R | W | L | D | E | D | N | K | S | T | L | Q | E | L | A | D | R | Y | G | V | S | A | E | R | V | R | Q | L | E | K | N | A | M | K | K | L |
Query Conservation |   |
|   |   |
|
|
|   |
|
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |
|
|
|
|   |   |   |
|   |   |   |   |   |
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |   |
|
|   |   |
| . | . | . | . |   |   |
|   |
|   |   |   |
|
|   |   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |
|
|
Template Sequence |   |
L | D | P | K | E | A | T | Y | L | R | W | I | . |
. |
. |
. |
A | V | G | K | T | X | E | E | I | A | D | V | E | G | V | K | Y | N | S | V | R | V | K | L | R | E | A | X | K | R | F |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | T | T | T |
|
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
174 | . | . | . | . | . | 180 | . | . | . | . | . | |
|
|
|
. | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|