 |
Job Description | P0AGB3 | Confidence | 94.01% | Date | Thu Jan 5 11:28:39 GMT 2012 |
Rank | 80 | Aligned Residues | 63 |
% Identity | 14% | Template | c3hyiA_ |
PDB info |
PDB header:transcription regulator | Chain: A: PDB Molecule:protein duf199/whia; |
PDBTitle: crystal structure of full-length duf199/whia from thermatoga maritima
|
Resolution | 2.34 Å |
|
 |
  |   |
212 | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | |
|
. | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | E | D | D | N | W | E | E | Q | A | A | N | R | L | T | D | A | . |
. |
M | Q | G | L | D | E | R | S | Q | D | I | I | R | A | R | W | L | D | E | D | N | K | S | T | L | Q | E | L | A | D | R | Y | G | V | S | A | E | R | V | R | Q | L | E | K | N | A | M | K |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
| . | . |
|   |   |
|   |   |
|
|
|   |
|
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |
|
|
|
|   |   |   |
|   |   |   |   |   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |
|
|   |   |
|   |   |
|   |
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |
|
|
|   | . | . |   |
|
|   |
|
|   |
|
|
|
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
Template Sequence |   |
A | N | S | T | A | R | Q | I | R | A | I | E | L | I | K | E | N | M | G | L | E | N | L | P | E | D | L | R | R | V | A | L | V | R | L | R | . |
. |
N | K | E | L | S | L | R | E | L | G | K | K | L | N | L | T | K | S | Q | I | Y | S | K | L | K | R | I | I | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  | . | . |
| T | T | S |
|  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
222 | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | |
|
. | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|