Job Description P0AGB3 Confidence 54.31% Date Thu Jan 5 11:28:39 GMT 2012 Rank 380 Aligned Residues 49 % Identity 18% Template c2dmqA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:lim/homeobox protein lhx9; PDBTitle: solution structure of the homeobox domain of lim/homeobox2 protein lhx9 Resolution UNK

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		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250			.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		L	D	E	R	S	Q	D	I	I	R	A	R	W	L	D	E	D	N	K	.	.	S	T	L	Q	E	L	A	D	R	Y	G	V	S	A	E	R	V	R	Q	L	E	K	N	A	M	K	K	L	R	A
Query Conservation																					.	.
Alig confidence																					.	.
Template Conservation
Template Sequence		F	K	H	H	Q	L	R	T	M	K	S	Y	F	A	I	N	H	N	P	D	A	K	D	L	K	Q	L	A	Q	K	T	G	L	T	K	R	V	L	Q	V	W	F	Q	N	A	R	A	K	F	R	R
Template Known Secondary structure																		S	S													T
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions