Job Description P39400 Confidence 100.00% Date Thu Jan 5 12:00:35 GMT 2012 Rank 3 Aligned Residues 330 % Identity 20% Template c4a10A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:octenoyl-coa reductase/carboxylase; PDBTitle: apo-structure of 2-octenoyl-coa carboxylase reductase cinf from2 streptomyces sp. Resolution 2.25 Å

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		2	.	.	.	.	.	.	.	10	.															.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	T	M	N	V	L	I	C	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	E	L	V	W	K	Q	R	E	I	P	I	P	G	D	N	E	A	L	I	K	I	K	S	V	G	I	C	G	T	D	I	H	A	W	G	G	N	Q	P	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	T	Y	L	A	L	H	L	R	A	E	D	A	D	M	F	K	G	V	A	D	K	D	V	R	K	S	L	R	L	G	E	V	P	M	P	E	L	A	P	D	E	V	L	V	A	V	M	A	S	S	I	N	Y	N	T	V	W	S	A	M	F	E	P	I	P	T	F	H	F	L	K	Q	N	A	R	Q	G	G	W
Template Known Secondary structure		S									G	G	G	T	T	T	T	T	T		S	S																			T	T																				T	T		S	S											T	T		G	G
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
						54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																																																																	.
Query SS confidence		.	.	.	.																																																																	.
Query Sequence		.	.	.	.	F	S	Y	P	R	V	L	G	H	E	I	C	G	E	I	V	G	L	G	K	N	I	A	D	L	K	N	G	Q	Q	V	A	V	I	P	Y	V	A	C	Q	Q	C	P	A	C	K	S	G	R	T	N	C	C	E	K	I	S	V	I	G	V	H	Q	D	.	G	G	F	S	E	Y	L	S	V	P	V
Query Conservation		.	.	.	.																																																																	.
Alig confidence		.	.	.	.																																					.																												.
Template Conservation																																										.
Template Sequence		A	T	R	H	D	Q	P	Y	H	V	L	G	S	D	C	S	G	V	V	V	R	T	G	I	G	V	R	R	W	K	P	G	D	H	V	I	V	H	P	A	.	H	V	D	E	Q	E	P	A	T	H	G	D	G	M	L	G	T	E	Q	R	A	W	G	F	E	T	N	F	G	G	L	A	E	Y	G	V	V	R	A
Template Known Secondary structure		G	G	G	G			S						S											T	T			S			T	T							S		.				T	T	S	G	G	G	G	T		T	T		S	T	T				T	T	T	T	S	S	S		S	S	B	S						G
Template Predicted Secondary structure																																										.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.							.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																														.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.
Query Sequence		A	N	I	L	P	A	D	G	I	D	P	Q	A	A	A	L	I	E	P	F	A	I	S	A	H	A	V	R	.	.	.	.	.	.	R	A	A	I	A	P	G	E	Q	V	L	V	V	G	A	G	P	I	G	L	G	A	A	A	I	A	K	A	D	G	A	Q	V	V	V	A	D	T	S	P	A	R	R	E	H	V
Query Conservation																														.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.
Template Conservation
Template Sequence		S	Q	L	L	P	K	P	A	H	L	T	W	E	E	A	A	V	S	P	L	C	A	G	T	A	Y	R	M	L	V	S	D	R	G	A	Q	M	K	Q	G	D	I	V	L	I	W	G	A	S	G	G	L	G	S	Y	A	I	Q	F	V	K	N	G	G	G	I	P	V	A	V	V	S	S	A	Q	K	E	A	A	V
Template Known Secondary structure		G	G						T	T	S							T	S												T	S	T	T	T	T				T	T						T	T	T	T	S													T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	R	L	E	L	P	L	L	D	P	S	A	E	D	F	D	A	Q	L	R	A	Q	F	G	G	S	L	A	Q	K	V	I	D	A	T	G	N	Q	H	A	M	N	N	T	V	N	L	I	R	H	G	G	T	V	V	F	V	G	L	F	K	G	E	L	Q	F	S	D	P	E	F	H	K	K	E	T	T	M	M
Query Conservation
Alig confidence																					.	.	.	.
Template Conservation																					.	.	.	.
Template Sequence		R	A	L	G	C	D	L	V	I	N	R	A	E	L	R	R	V	V	E	.	.	.	.	T	G	R	K	L	A	K	L	V	V	E	K	A	G	R	E	P	D	I	V	F	E	H	T	G	R	V	T	F	G	L	S	V	I	V	A	R	R	G	G	T	V	V	T	C	N	R	Y	L	W	M	K	L	K	K	I	V
Template Known Secondary structure				T	T							T	T								.	.	.	.														S	S			S						S		S	T									S		T	T												T	T	T
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280					.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	R	N	A	T	P	E	D	F	A	K	V	G	R	L	M	A	E	G	K	I	T	A	D	M	M	L	T	H	R	Y	P	F	A	T	L	A	E	T	Y	E	R	D	V	I	N	N	R	E	L	I	K	G	V	I	T
Query Conservation
Alig confidence																										.	.																	.
Template Conservation																										.	.																	.
Template Sequence		G	S	H	G	A	N	H	E	E	Q	Q	A	T	N	R	L	F	E	S	G	A	V	V	P	.	.	A	M	S	A	V	Y	P	L	A	E	A	A	E	A	C	R	.	V	V	Q	T	S	R	Q	V	G	K	V	A	V	L
Template Known Secondary structure					S															T	T	S	S			.	.								G	G	G							.				T	T		B	S	S
Template Predicted Secondary structure																										.	.																	.
Template SS confidence
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.			.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.		.	400	.	.	.	.	.	.	.	.	.	410	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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