Job Description P39400 Confidence 100.00% Date Thu Jan 5 12:00:35 GMT 2012 Rank 53 Aligned Residues 307 % Identity 16% Template c3tqhA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:quinone oxidoreductase; PDBTitle: structure of the quinone oxidoreductase from coxiella burnetii Resolution 2.44 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.				.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure															.	.	.																																							.	.	.	.	.
Query SS confidence															.	.	.																																							.	.	.	.	.
Query Sequence		S	T	M	N	V	L	I	C	Q	Q	P	K	E	.	.	.	L	V	W	K	Q	R	E	I	P	I	P	G	D	N	E	A	L	I	K	I	K	S	V	G	I	C	G	T	D	I	H	A	W	G	G	N	Q	P	.	.	.	.	.	F	F	S	Y	P	R	V	L	G	H	E	I	C	G	E	I	V	G	L	G	K
Query Conservation															.	.	.																																							.	.	.	.	.
Alig confidence															.	.	.																																							.	.	.	.	.
Template Conservation
Template Sequence		K	E	X	K	A	I	Q	F	D	Q	F	G	P	P	K	V	L	K	L	V	D	T	P	T	P	E	Y	R	K	N	Q	X	L	I	K	V	H	A	A	S	L	N	P	I	D	Y	K	T	R	N	G	S	G	F	V	A	K	K	L	K	N	N	L	P	S	G	L	G	Y	D	F	S	G	E	V	I	E	L	G	S
Template Known Secondary structure										S	S	S		S	G	G	G													T	T																				T	T		S							T	T	S		S	B															T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	A	D	L	K	N	G	Q	Q	V	A	V	I	P	Y	V	A	C	Q	Q	C	P	A	C	K	S	G	R	T	N	C	C	E	K	I	S	V	I	G	V	H	Q	D	G	G	F	S	E	Y	L	S	V	P	V	A	N	I	L	P	A	D	G	I	D	P	Q	A	A	A	L	I	E	P	F	A	I	S	A	H
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	N	N	V	N	I	G	D	K	V	X	G	I	A	G	F	P	D	H	P	C	C	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	Y	V	C	A	S	P	D	T	I	I	Q	K	L	E	K	L	S	F	L	Q	A	A	S	L	P	T	A	G	L	T	A	L	Q
Template Known Secondary structure		T			S			T	T								S	T	T	T					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	S						G	G	G						T	T	S								S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.																						.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	R	R	A	A	I	A	P	G	E	Q	V	L	V	V	G	A	G	P	I	G	L	G	A	A	A	I	A	K	A	D	G	A	Q	V	V	V	A	D	T	S	P	A	R	R	E	H	V	A	T	R	L	E	L	P	L	L	D	P	S	A	E	D	F	D	A	Q	L	R	A	Q	F	G	G	S	L	A	Q	K
Query Conservation
Alig confidence																																																																						.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.
Template Sequence		A	L	N	Q	A	E	V	K	Q	G	D	V	V	L	I	H	A	G	A	G	G	V	G	H	L	A	I	Q	L	A	K	Q	K	G	T	T	V	I	T	T	A	S	K	R	N	H	A	F	L	K	A	L	G	A	E	Q	C	I	N	Y	H	E	E	D	F	L	L	A	.	.	.	.	.	.	I	S	T	P	V	D
Template Known Secondary structure						T	T			T	T						S	S	T	T	S													T	T																			T		S					T	T	T	S						.	.	.	.	.	.			S
Template Predicted Secondary structure																																																																						.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.							.	210	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	D	A	T	G	N	Q	H	A	M	N	N	T	V	N	L	I	R	H	G	G	T	V	V	F	V	G	L	F	K	G	E	L	Q	F	S	D	P	E	F	H	K	K	E	T	T	M	M	G	S	R	N	A	T	P	E	D	F	A	K	V	G	R	L	M	A	E	G	K	I	T	A	D	M	M	L	T	H	R
Query Conservation
Alig confidence																																															.																												.	.
Template Conservation																																															.																												.	.
Template Sequence		A	V	I	D	L	V	G	G	D	V	G	I	Q	S	I	D	C	L	K	E	T	G	C	I	V	S	V	P	T	I	T	A	G	R	V	I	E	V	A	K	Q	K	H	R	R	.	A	F	G	L	L	K	Q	F	N	I	E	E	L	H	Y	L	G	K	L	V	S	E	D	K	L	R	I	.	.	E	I	S	R	I
Template Known Secondary structure						S	S									G	G	G												S	T	T											T	T			.																						T	T	S	S			.	.
Template Predicted Secondary structure																																															.																												.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	F	A	T	L	A	E	T	Y	E	R	D	V	I	N	N	R	E	L	I	K	G	V	I	T
Query Conservation
Alig confidence													.
Template Conservation													.
Template Sequence		F	Q	L	S	E	A	V	T	A	H	E	.	L	L	E	T	G	H	V	R	G	K	L	V	F	K
Template Known Secondary structure				G	G	G							.				T	T				S
Template Predicted Secondary structure													.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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