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Job DescriptionP39400
Confidence100.00%DateThu Jan 5 12:00:35 GMT 2012
Rank56Aligned Residues334
% Identity13%Templatec3iupB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:putative nadph:quinone oxidoreductase; PDBTitle: crystal structure of putative nadph:quinone oxidoreductase2 (yp_296108.1) from ralstonia eutropha jmp134 at 1.70 a resolution
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3...... 10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  TMNVLIC. QQPKELVWKQREIPIPGDNEALIKIKSVGICGTDIHAWGGNQPFFSYPRVLGHEICGEIVGLGKNIADLKNG
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Template Sequence  QLRSRIKSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADXSTAKASGTAERPIVTARVPEGAXRSXAG
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TTS




TT

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GGGGGGGGG
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   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   82.......90.........100......... 110.........120.........130.........140...... ...150......
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Query Sequence  QQVAVIPYVACQQCPACKSGRTNCCEKI. . SVIGVHQDGGFSEYLSVPVANILPADGIDPQAAALIE. . . PFAISAHAVR
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Template Sequence  RLDASXPVGNEGAGVVVEAGSSPAAQALXGKTVAAIGGAXYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGXVET
Template Known Secondary structure  GTT

S

SSTTTT


S

SBSGGG

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   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   157..160.........170.........180.........190.........200.........210.........220.........230......
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Query Sequence  RAAIAPGEQVLVVGAGPIGLGAAAIAKADGAQVVVADTSPARREHVATRLELPLLDPSAEDFDAQLRAQFGGSLAQKVID
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Template Sequence  XRLEGHSALVHTAAASNLGQXLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFXQDLTEALVSTGATIAFD
Template Known Secondary structure  TT
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SSTTST

SSTT
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   166...170.........180.........190.........200.........210.........220.........230.........240.....
 
   237..240.........250.. .......260.........270.........280....... ..290..
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Query Sequence  ATGNQHAMNNTVNLIR. . . . . . . . . . . . . . . HGGTVVFVGLFKGELQFSDPEFHKKETTMMGSRNA. . . . . . . . . TPEDF
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Template Sequence  ATGGGKLGGQILTCXEAALNKSAREYSRYGSTTHKQVYLYGGLDTSPTEFNRNFGXAWGXGGWLLFPFLQKIGRERANAL
Template Known Secondary structure  S
ST

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TT

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   246...250.........260.........270.........280.........290.........300.........310.........320.....
 
   293......300.........310.........320.. .......330.........
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Query Sequence  AKVGRLMAEGKITADMMLTHRYPFATLAET. . YERDVINNRELIKGVIT
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Template Sequence  KQRVVAELKTTFASH. . YSKEISLAEVLDLDXIA. VYNKRATGEKYLIN
Template Known Secondary structure  TTTTTT


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   326...330.........340 .........350....... ..360.........370.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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