Job Description P39400 Confidence 100.00% Date Thu Jan 5 12:00:35 GMT 2012 Rank 48 Aligned Residues 312 % Identity 15% Template c3gmsA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative nadph:quinone reductase; PDBTitle: crystal structure of putative nadph:quinone reductase from2 bacillus thuringiensis Resolution 1.76 Å

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		3	.	.	.	.	.	.	10	.	.	.	.					.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.																																							.
Query SS confidence														.	.	.	.																																							.
Query Sequence		T	M	N	V	L	I	C	Q	Q	P	K	E	.	.	.	.	L	V	W	K	Q	R	E	I	P	I	P	G	D	N	E	A	L	I	K	I	K	S	V	G	I	C	G	T	D	I	H	A	W	G	G	N	Q	P	.	F	F	S	Y	P	R	V	L	G	H	E	I	C	G	E	I	V	G	L	G	K	N	I	A	D
Query Conservation														.	.	.	.																																							.
Alig confidence														.	.	.	.																																							.
Template Conservation
Template Sequence		H	G	K	L	I	Q	F	H	K	F	G	N	P	K	D	V	L	Q	V	E	Y	K	N	I	E	P	L	K	D	N	E	V	F	V	R	M	L	V	R	P	I	N	P	S	D	L	I	P	I	T	G	A	Y	A	H	R	I	P	L	P	N	I	P	G	Y	E	G	V	G	I	V	E	N	V	G	A	F	V	S	R
Template Known Secondary structure									S	S		S																		T	T																	G	G	G	G	T	T	T	T	T	T	S		S	S	B				S											T	T	S		G
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	N	G	Q	Q	V	A	V	I	P	Y	V	A	C	Q	Q	C	P	A	C	K	S	G	R	T	N	C	C	E	K	I	S	V	I	G	V	H	Q	D	G	G	F	S	E	Y	L	S	V	P	V	A	N	I	L	P	A	D	G	I	D	P	Q	A	A	A	L	I	E	P	F	A	I	S	A	H	A	V	R	R
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	I	G	K	R	V	L	P	L	R	G	E	G	T	W	Q	E	Y	V	K	T	S	A	D	F	V	V	P	I	P	D	S	I	D	D	F	T	A	A	Q	M	Y	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	L	T	A	W	V	T	C	T	E	T	L
Template Known Secondary structure		G	G	T	T							S	S	S		S	S	B	S						G	G	G						T	T	S						T	T	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T	S
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.																								.	.	.	.	130	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	I	A	P	G	E	Q	V	L	V	V	G	A	G	P	I	G	L	G	A	A	A	I	A	K	A	D	G	A	Q	V	V	V	A	D	T	S	P	A	R	R	E	H	V	A	T	R	L	E	L	P	L	L	D	P	S	A	E	D	F	D	A	Q	L	R	A	Q	F	G	G	S	L	A	Q	K	V	I	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	Q	R	N	D	V	L	L	V	N	A	C	G	S	A	I	G	H	L	F	A	Q	L	S	Q	I	L	N	F	R	L	I	A	V	T	R	N	N	K	H	T	E	E	L	L	R	L	G	A	A	Y	V	I	D	T	S	T	A	P	L	Y	E	T	V	M	E	L	T	N	G	I	G	A	D	A	A	I	D	S
Template Known Secondary structure					T	T						S	S	T	T	S														T								S	S	S	T	T								T		S					T	T	T	S										T	T	T	S								S
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.											.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	N	Q	H	A	M	N	N	T	V	N	L	I	R	H	G	G	T	V	V	F	V	G	L	F	K	G	E	L	Q	F	S	D	P	E	F	H	K	K	E	T	T	M	M	G	S	R	N	A	T	.	.	.	.	.	.	.	.	.	.	P	E	D	F	A	K	V	G	R	L	M	A	E	G	K	I	T	A	D
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.
Alig confidence					.																																																.	.	.	.	.	.	.	.	.	.
Template Conservation					.
Template Sequence		I	G	G	.	P	D	G	N	E	L	A	F	S	L	R	P	N	G	H	F	L	T	I	G	L	L	S	G	I	Q	V	N	W	A	E	I	V	T	K	A	K	V	H	A	N	I	F	H	L	R	H	W	N	D	E	V	S	P	Y	K	W	Q	E	T	F	R	H	L	I	R	L	V	E	N	E	Q	L	R	F	M
Template Known Secondary structure		S			.									T													T	T	S											T	S																S																		T	T	S	S
Template Predicted Secondary structure					.
Template SS confidence
		219	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	M	L	T	H	R	Y	P	F	A	T	L	A	E	T	Y	E	R	D	V	I	N	N	R	E	L	I	K	G	V	I	T
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		K	.	V	H	S	T	Y	E	L	A	D	V	K	A	A	V	D	V	V	Q	S	A	E	K	T	K	G	K	V	F	L	T
Template Known Secondary structure			.							G	G	G											T	T			S	S
Template Predicted Secondary structure			.
Template SS confidence
		298		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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