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Job DescriptionP39400
Confidence100.00%DateThu Jan 5 12:00:35 GMT 2012
Rank51Aligned Residues318
% Identity9%Templatec2w4qA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:prostaglandin reductase 2; PDBTitle: crystal structure of human zinc-binding alcohol2 dehydrogenase 1 (zadh1) in ternary complex with nadp and3 18beta-glycyrrhetinic acid
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MSTMNVLICQQ. . . . . . . . . PKELVWKQREIPIP. GDNEALIKIKSVGICGTDIHAWGGNQPFF. SYPRVLGHEICGEIV
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Template Sequence  MMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGI
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TTS


GGG
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TT

TTTSS

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BTSB
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   0.........10.........20.........30.........40.........50.........60.........70.........
 
   70.........80.........90.........100.........110.........120.........130.........140.......
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Query Sequence  . . GLGKNIADLKNGQQVAVIPYVACQQCPACKSGRTNCCEKISVIGVHQDGGFSEYLSVPVANILPADGIDPQAAALIEP
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Template Sequence  GIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLG. . . . . . . . . . . . . . . . . . . AIGMPGLTS
Template Known Secondary structure 
STT

TT
SBSGGG


GGGGTT
GGGGGT...................TTS
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   80.........90.........100.........110.........120.........130. ........140
 
   148.150.........160.........170.........180.........190.........200.........210.........220.......
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Query Sequence  FAISAHAVRRAAIAPGEQVLVVGAGPIGLGAAAIAKADGAQVVVADTSPARREHVATRLELPLLDPSAEDFDAQLRAQFG
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Template Sequence  LIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRES
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TT


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   141........150.........160.........170.........180.........190.........200.........210.........220
 
   228.230.........240.........250.........260.... .....270.........280......... 290..
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Query Sequence  GSLAQKVIDATGNQHAMNNTVNLIRHGGTVVFVGLFK. . . . . . . . . . GELQFSDPEFHKKETTMMGSRNATP. . . . . EDF
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Template Sequence  CPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGI
Template Known Secondary structure 
TT
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TT


GGGTTS


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TT


GGGGGGG
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   221........230.........240.........250.........260.........270.........280.........290.........300
 
   293......300.........310.........320.........330.........340
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Query Sequence  AKVGRLMAEGKITADMMLTHRYPFATLAETYERDVINNRELIKGVITF
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Template Sequence  LQLSQWFKEGKLKI. . KETVINGLENMGAAFQS. MMTGGNIGKQIVCI
Template Known Secondary structure  TT
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   301........310.... .....320.........330. ........340.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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