Job Description P39400 Confidence 100.00% Date Thu Jan 5 12:00:35 GMT 2012 Rank 36 Aligned Residues 327 % Identity 21% Template c2vwpA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glucose dehydrogenase; PDBTitle: haloferax mediterranei glucose dehydrogenase in complex2 with nadph and zn. Resolution 2.01 Å

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		4	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.																																													.	.	.
Query SS confidence									.																																													.	.	.
Query Sequence		M	N	V	L	I	C	Q	.	Q	P	K	E	L	V	W	K	Q	R	E	I	P	I	P	G	D	N	E	A	L	I	K	I	K	S	V	G	I	C	G	T	D	I	H	A	W	G	G	N	Q	P	F	F	.	.	.	S	Y	P	R	V	L	G	H	E	I	C	G	E	I	V	G	L	G	K	N	I	A	D	L	K
Query Conservation									.																																													.	.	.
Alig confidence									.																																													.	.	.																			.	.
Template Conservation																																																																											.	.
Template Sequence		M	K	A	I	A	V	K	R	G	E	D	R	P	V	V	I	E	K	P	R	P	E	P	E	S	G	E	A	L	V	R	T	L	R	V	G	V	D	G	T	D	H	E	V	I	A	G	G	H	G	G	F	P	E	G	E	D	H	L	V	L	G	H	E	A	V	G	V	V	V	D	P	N	.	.	D	T	E	L	E
Template Known Secondary structure									T	T			S													T	T																					T		T	T	S	S		T	T		S																T	.	.	T	S	S
Template Predicted Secondary structure																																																																											.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.						.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.
Query SS confidence																																			.	.	.	.	.
Query Sequence		N	G	Q	Q	V	A	V	I	P	Y	V	A	C	Q	Q	C	P	A	C	K	S	G	R	T	N	C	C	E	K	I	S	V	I	.	.	.	.	.	G	V	H	Q	D	G	G	F	S	E	Y	L	S	V	P	V	A	N	I	L	P	A	D	G	I	D	P	Q	A	A	A	L	I	E	P	F	A	I	S	A	H	A
Query Conservation																																			.	.	.	.	.
Alig confidence																																			.	.	.	.	.
Template Conservation
Template Sequence		E	G	D	I	V	V	P	T	V	R	R	P	P	A	S	G	T	N	E	Y	F	E	R	D	Q	P	D	M	A	P	D	G	M	Y	F	E	R	G	I	V	G	A	H	G	Y	M	S	E	F	F	T	S	P	E	K	Y	L	V	R	I	P	R	S	Q	A	E	L	G	F	L	I	E	P	I	S	I	T	E	K	A
Template Known Secondary structure		T	T							S					T	T								T	T		G	G	G			T	T	S					T	T	B					S		B	S						G	G	G						G	G	G	S	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		155							.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.							.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure			.	.	.	.	.	.																																							.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.																																							.	.	.	.	.	.
Query Sequence		V	.	.	.	.	.	.	R	R	A	A	I	A	P	G	E	Q	V	L	V	V	G	A	G	P	I	G	L	G	A	A	A	I	A	K	A	D	G	A	Q	V	V	V	A	D	.	.	.	.	.	.	T	S	P	A	R	R	E	H	V	A	T	R	L	E	L	P	L	L	D	P	S	A	E	D	F	D	A	Q	L
Query Conservation			.	.	.	.	.	.																																							.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.																																							.	.	.	.	.	.																								.	.	.	.
Template Conservation																																																																												.	.	.	.
Template Sequence		L	E	H	A	Y	A	S	R	S	A	F	D	W	D	P	S	S	A	F	V	L	G	N	G	S	L	G	L	L	T	L	A	M	L	K	V	D	D	K	G	Y	E	N	L	Y	C	L	G	R	R	D	R	P	D	P	T	I	D	I	I	E	E	L	D	A	T	Y	V	D	S	R	Q	T	P	.	.	.	.	V	E
Template Known Secondary structure									T	T	T	S													S														T	T			S										S	S										T	T						T	T	T	S		.	.	.	.	G	G
Template Predicted Secondary structure																																																																												.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.					.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.						.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.																											.
Query SS confidence																																														.	.	.	.	.																											.
Query Sequence		R	A	Q	F	G	G	S	L	A	Q	K	V	I	D	A	T	G	N	Q	H	A	M	N	N	T	V	N	L	I	R	H	G	G	T	V	V	F	V	G	L	F	K	G	E	.	.	.	.	.	L	Q	F	S	D	P	E	F	H	K	K	E	T	T	M	M	G	S	R	N	A	T	P	E	D	F	.	A	K	V	G
Query Conservation																																														.	.	.	.	.																											.
Alig confidence																																														.	.	.	.	.																											.
Template Conservation
Template Sequence		D	V	P	D	V	Y	E	Q	M	D	F	I	Y	E	A	T	G	F	P	K	H	A	I	Q	S	V	Q	A	L	A	P	N	G	V	G	A	L	L	G	V	P	S	D	W	A	F	E	V	D	A	G	A	F	H	R	E	M	V	L	H	N	K	A	L	V	G	S	V	N	S	H	V	E	H	F	E	A	A	T	V
Template Known Secondary structure		G					T										S																																												T	T
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	M	A	E	G	K	I	T	A	D	M	M	L	T	H	R	Y	P	F	A	T	L	A	E	T	Y	E	R	D	V	I	N	N	R	E	L	I	K	G	V	I	T	F
Query Conservation
Alig confidence																														.	.	.	.
Template Conservation																														.	.	.	.
Template Sequence		T	F	T	K	L	P	K	W	F	L	E	D	L	V	T	G	V	H	P	L	S	E	F	E	A	A	F	D	.	.	.	.	D	D	D	T	T	I	K	T	A	I	E	F
Template Known Secondary structure						S															G	G	G	G	G	G	G	G		.	.	.	.		S	T	T
Template Predicted Secondary structure																														.	.	.	.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.					.	.	.	.	.	.	.	350	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions